Re: [Pw_forum] MD trajectories in NVE and NVT condition

2016-07-22 Thread hqzhou
You simply cannot get 2 pico second trajectory in 10 steps! Your timestep may at most be 1fs. Huiqun Zhou -- Original -- From: "Narendranath Ghosh"; Date: Fri, Jul 22, 2016 02:17 AM To: "pw_forum"; Subject:

[Pw_forum] 回复: Re: libmkl_intel_lp64 (QE 4.2 vs 4.3)

2011-07-03 Thread hqzhou
Masoud, While you used generic BLAS/LAPACK libraries when you compiled your qe 4.2, you were using MKL in compiling qe 4.3.1. But the compiler never found where the MKL libraries are. How did you set the environment for MKL? You should "source" the mklvarsem64t.sh in .bashrc or .bash_profile as

[Pw_forum] Parallel bandstructure calculations

2010-08-24 Thread hqzhou
Hi, You have 32 CPU cores that devided into 4 pools, so you have only 8 CPU cores for each pool. 8 is not a square of any integer, and it's why it used serial algorithm. you need to run mpirun -np 32 pw.x -npool 2 -ndiag 4 BUT, you'd better make tests to determine the best combination. For my

[Pw_forum] 回复: Intel MPI

2010-08-19 Thread hqzhou
Paolo, I have been using Intel MPI these years, from its 2.x, 3.1 to 3.2 now. I use it with two job schedulers, torque and lsf, on two clusters of course. At least, there are no big problems. I had ever tried to switch to openmpi, but found it was slower than Intel MPI at that time (about 3

[Pw_forum] question about electron phonon calculation

2009-03-08 Thread hqzhou
It simply means that using pools in phonon calculation is meaningless. But it may not be the main cause of your error. Dr. Huiqun Zhou @Earth Sciences, Nanjing University, China

[Pw_forum] Use of pool

2009-02-26 Thread hqzhou
Axel, Thank you very much for your response! > please note that benchmark numbers are useless without > offering a way to reproduce them. so please provide the > the input used for this test. > Sorry, I'm out of town right now, I'll send the input file to you directly as soon as I return home.

[Pw_forum] nonmagnetic solution of bct Fe

2008-01-24 Thread hqzhou
Your system should have only one atom and then you can get a slightly smaller total and absolute magnetization than Fe-bcc. Dr. Huiqun Zhou @Nanjing University, China > -Original Message- > ???: Hongbin Zhang > ??: Wed, 23 Jan 2008 19:19:09 +0100 > ???: > ??: [Pw_forum] nonmagnetic