[Pw_forum] Too big atomic spheres error

2014-04-14 Thread raha khalili
Dear Dr. Sclauzero I appreciate your reply. It is so helpful. Best Regards Khadije On Mon, Apr 14, 2014 at 6:11 PM, Sclauzero Gabriele < gabriele.sclauzero at mat.ethz.ch> wrote: > > > > > > > Dear Dr. Sclauzero > > Thanks a lot for your help and suggestion. I studied mentioned examples > and

[Pw_forum] Too big atomic spheres error

2014-04-14 Thread raha khalili
Dear Dr. Sclauzero Thanks a lot for your help and suggestion. I studied mentioned examples and changed my input files. I separated electrodes in another file with prefix='au', molecule with prefix='adn' and pwcond.x with prefixl='au', prefixs='adn' and prefixs='au'. Could you tell if I am in right

[Pw_forum] Too big atomic spheres error

2014-04-14 Thread Gabriele Sclauzero
Dear Khadije, If you withheld the atomic positions is difficult to understand your problem and give suggestions. I guess the one below is the scattering region. What about the leads? If you specify prefixt, then you need to use bdl to compute transmission (assuming that your cell also con

[Pw_forum] Too big atomic spheres error

2014-04-14 Thread Sclauzero Gabriele
Dear Dr. Sclauzero Thanks a lot for your help and suggestion. I studied mentioned examples and changed my input files. I separated electrodes in another file with prefix='au', molecule with prefix='adn' and pwcond.x with prefixl='au', prefixs='adn' So fast! Please have a look at Alexande

[Pw_forum] Too big atomic spheres error

2014-04-14 Thread raha khalili
Dear PW users I am trying to calculate transmission coefficient of a molecular wire using espresso-5.0.2. The output returns with the error %% Error in routine init_orbitals (1): Too big atomic spheres %% Below is the inp