Re: [Wien] Error while running IRelast - calljob_lapw

2022-09-06 Thread Laurence Marks
Color is not a good diagnostic as it varies with OS, terminal and user preferences. Often executables do not show as green, so this answer is not correct. Look at https://www.baeldung.com/linux/bash-check-file-executable for how to read the output of the "ls" command. This will always work. --

Re: [Wien] Error while running IRelast - calljob_lapw

2022-09-06 Thread Morteza Jamal via Wien
Please check whether initIR_lapw is as an Executable program or not. Usually color of EXE program is as green color when you get "ls" in terminal. ___ Wien mailing list Wien@zeus.theochem.tuwien.ac.at

[Wien] Error while running IRelast - calljob_lapw

2022-09-06 Thread AJAY SINGH VERMA
Dear all, While running elastic constant of cubic TiC, this is the error encountered root/Wien2k/SRC_IRelast/script-elastic/x: Command not found. \n stop error \n clmextrapol_lapw did not extrapolate new density because of missing TiC.rsp head: cannot open 'TiC.inm' for reading: No such file or

Re: [Wien] Error : configure: error: could not find mpi library for --enable-mpi while installing fftw

2022-09-05 Thread Gavin Abo
I looked into this further, and below is my Ubuntu bash terminal output. By removing mpicc from my environment, I was able to reproduce your reported error: username@computername:~/fftw-3.3.10$ which mpicc username@computername:~/fftw-3.3.10$ grep openmpi ~/.bashrc

Re: [Wien] Error : configure: error: could not find mpi library for --enable-mpi while installing fftw

2022-09-05 Thread Gavin Abo
The openmpi-4.1.4 might not be installed.  What does "which mpicc" return as output? On 9/5/2022 8:52 AM, AJAY SINGH VERMA wrote: Dear all, I am following below pdf to install wien2k [WIEN2k 21.1 Install with gfortran August 1, 2022 Linux Operating System Version (lsb_release -a): Ubuntu

[Wien] Error : configure: error: could not find mpi library for --enable-mpi while installing fftw

2022-09-05 Thread AJAY SINGH VERMA
Dear all, I am following below pdf to install wien2k [WIEN2k 21.1 Install with gfortran August 1, 2022 Linux Operating System Version (lsb_release -a): Ubuntu 22.04 LTS Fortran Compiler Version (gfortran --version): gfortran 11.2.0 WIEN2k Version (cat $WIENROOT/WIEN2k_VERSION): 21.1 (Release

Re: [Wien] Error in IRelast

2022-09-03 Thread Gavin Abo
Based on your post below, the -llapack_lapw in your compiler settings (adjustable in siteconfig) has a dash (-) in it.  However, the dash is missing in -llapack, which looks like it could cause that error. Instead of "-llapack_lapw -lblas_lapw -lblas -llapack", it is noted that some prefer to

Re: [Wien] Error in IRelast

2022-09-03 Thread Peeyush Kumar Kamlesh
Dear sir, After following the steps in provided solution, i am getting gfortran -o ../C_setupc1112 C_setupc1112.o getcalljobC.o makestructC.o -ffree-form -O2 -ftree-vectorize -march=native -ffree-line-length-none -ffpe-summary=none -L../SRC_lib -llapack_lapw -lblas_lapw -lblas llapack

Re: [Wien] Error in IRelast

2022-09-03 Thread morteza jamal via Wien
This means, IRelast package can not find C_setupc1112 program in the main directory which you have installed WIEN2k package and it is clear IRelast package have not installed correctly and you must recompile it. Please do the steps that "Gavin Abo" have obtained them. With best,Morteza

Re: [Wien] Error in IRelast

2022-09-03 Thread Laurence Marks
I think some improvements are needed to IRelast from one of the developers: a) Change and provide Peter with a better installation script. It seems that there are numerous problems with this. b) Go through the code/scripts and provide detailed user error & warnings. These are not for the expert,

Re: [Wien] Error in IRelast

2022-09-03 Thread Gavin Abo
Check the directory where your WIEN2k installation is. C_setupc1112 should be a non-empty file there.  On my system for example, I find C_steupc1112 under my WIEN2k folder: username@computername:~$ ls -l $WIENROOT/C_setupc1112 -rwxrwxr-x 1 username username 54120 Jul  5 07:09

[Wien] Error in IRelast

2022-09-03 Thread Peeyush Kumar Kamlesh
Dear Users, I am using WIEN2k 21.1. While running set_elast_lapw in IRelast of a material of space-group 225, i am facing following error: setup information for (c11+2c12) elastic constant calculation: C_setupc1112: command not found chmod: cannot access 'CUBIC.job': no such file or directory

Re: [Wien] Error while calculating elastic constant using IRelast

2022-07-05 Thread 413119008
Thank you very much sir.Now its working fine. with regards, Narayanan Namboodiri P Research scholar Quoting Gavin Abo : On page 138 of the WIEN2k 21.1 usersguide [1], you can see that the .in1 file format of the second line should be: 7.500 10 4 ELPA pxq BL 64 (R-mt*K-max; MAX l,

Re: [Wien] Error in MoS2 doped with Ti

2022-07-05 Thread Gavin Abo
I believe I have experienced that in the past, where it seemed quite normal in some rare cases that sometimes sgroup would have to be ran more than once to shuffle the atomic positions and/or lattice parameters around until sgroup locked in on the equivalent arrangement that it likes.

[Wien] Error in MoS2 doped with Ti

2022-07-05 Thread delamora
Thank you, But there is something strange; If MoS2-Ti.struct is the doped supercell but without having run "x struct", then if I do; x sgroup cp MoS2-Ti.struct_sgroup MoS2-Ti.struct init -b it does not work But if I do; x sgroup cp MoS2-Ti.struct_sgroup MoS2-Ti.struct x sgroup cp

Re: [Wien] Error in MoS2 doped with Ti

2022-07-05 Thread Laurence Marks
sgroup always gives a correct cell. It might not be the one you think, but there is never anything wrong with it. On Tue, Jul 5, 2022 at 1:16 PM delamora wrote: > Lawrence Marks, > With "sgroup" the impurity was at the corner "0,0,0" > With your instructions; > -- > Now go through the

[Wien] Error in MoS2 doped with Ti

2022-07-05 Thread delamora
Lawrence Marks, With "sgroup" the impurity was at the corner "0,0,0" With your instructions; -- Now go through the initialization AND EVERY TIME IT ASKS YOU IF YOU WANT TO ACCEPT THE CHANGE SAY "Y" (yes). - the impurity went into the cell "1/3, 2/3, 0.2" and the initiation was

Re: [Wien] Error in MoS2 doped with Ti

2022-07-05 Thread Laurence Marks
Go to the directory, do "mkdir Bad ; cp * Bad ; mv MoS2-Ti-3.struct t ; rm MoS2* ; mv t MoS2-Ti.struct" Now go through the initialization AND EVERY TIME IT ASKS YOU IF YOU WANT TO ACCEPT THE CHANGE SAY "Y" (yes). On Tue, Jul 5, 2022 at 12:53 PM delamora wrote: > Gavin Abo and Lawrence Marks, >

Re: [Wien] Error in MoS2 doped with Ti

2022-07-05 Thread delamora
Gavin Abo and Lawrence Marks, Thanks for your answers, but I still get the same problem I make the supercell, add an impurity (Ti) calculate Rmt then I try two possibilities a) I run "sgroup" and get the new struct file b) I run "nn" get the new file and then "sgroup" and get the new file in

Re: [Wien] Error while calculating elastic constant using IRelast

2022-07-05 Thread Gavin Abo
On page 138 of the WIEN2k 21.1 usersguide [1], you can see that the .in1 file format of the second line should be: 7.500 10 4 ELPA pxq BL 64 (R-mt*K-max; MAX l, max l for hns ) However, your MgO.in1 has:  8 8.0   4   ELPA pxq BL 64 (R-MT*K-MAX,MAX L IN WF,V-NMT,LIB) The value for MAX L IN WF

Re: [Wien] Error while calculating elastic constant using IRelast

2022-07-05 Thread 413119008
i have attached the file with the mail.Please find the attachment with regards Narayanan Quoting Gavin Abo : There appears to a problem with the contents of your MgO.in1 file.  You would need to share your MgO.in1 file, if you need further assistance with that. Kind Regards, Gavin

Re: [Wien] Error while calculating elastic constant using IRelast

2022-07-05 Thread Gavin Abo
There appears to a problem with the contents of your MgO.in1 file.  You would need to share your MgO.in1 file, if you need further assistance with that. Kind Regards, Gavin WIEN2k user On 7/5/2022 9:01 AM, 413119...@nitt.edu wrote: Thank you very much sir for your help.Now that error is

Re: [Wien] Error in MoS2 doped with Ti

2022-07-04 Thread Laurence Marks
A comment, which has been mentioned many times in the list. Unless you are an expert you should accept what nn, sgroup and symmetry suggest. Ignoring them will often lead to errors or crashes. -- Professor Laurence Marks Department of Materials Science and Engineering, Northwestern University

Re: [Wien] Error in MoS2 doped with Ti

2022-07-04 Thread Gavin Abo
You might try the attached MoS2-Ti.struct which was generated by sgroup.  Though, you will probably want to double-check it for example in XCrySDen or VESTA to ensure that it still looks right. The previous MoS2-Ti.struct that you sent stops with an error "STOP 2 missing" in "x symmetry" for

[Wien] Error in MoS2 doped with Ti

2022-07-04 Thread delamora
Dear Gavin, Thank you for your reply, but I still get the same problem; In the last struct file I did the supercell and added the Ti atom, but afterwards I did not calculated the Rmt. Now in this struct I that I include here I did it and I get Rmt Mo; 2.41, S; 1.78, Ti; 2.07 Then with "init" I

Re: [Wien] Error in MoS2 doped with Ti

2022-07-04 Thread Gavin Abo
I suggest you address the errors from "x nn" first such as that for "RMT( 22)=2.0 AND RMT( 20)=2.1". Using setrmt and accepting the MoS2-Ti-3.struct_setrmt might fix that.  Then, you might want to accept the file from sgroup (e.g., cp MoS2-Ti-3.struct_sgroup MoS2-Ti-3.struct).  When I

[Wien] Error in MoS2 doped with Ti

2022-07-04 Thread delamora
Dear Wien community, I am trying to dope MoS2 which is --- SG 194 a,b,c = 3.168, 3.168, 12.322 90, 90, 120 Mo: 1/3, 2/3, 1/4 S: 1/3, 2/3, 0.625 --- I make a 3x3x1 supercell and add a Ti atom at 8/9, 1/9, 0.95 With "sgroup" the SG=156 P3m1 (file attached) and when I

Re: [Wien] Error while calculating elastic constant using IRelast

2022-07-04 Thread Gavin Abo
That may be due to a gfortran compiler incompatibility with the code.  There is an experimental patch named "calLa_Pre_elast.patch" that you could give a try.  It is at: https://github.com/gsabo/WIEN2k-Patches/tree/master/21.1 Kind Regards, Gavin WIEN2k user On 7/4/2022 7:46 AM,

[Wien] Error while calculating elastic constant using IRelast

2022-07-04 Thread 413119008
Respected sir, I am using WIEN@K.21.1 in my work station with ubuntu OS.I was trying to do the Elastic constant calculation using IRelast,but i was getting folllowing error. I run 'set_elast_lapw' then give no.of pressure then value of pressure After that i am

Re: [Wien] Error while calculating elastic constant using IRelast

2022-06-04 Thread Hamza Bouafia
you can simply copy all the files of SRC_IRelast/script-elastic/* to $WIENROOT. Le dim. 5 juin 2022 à 00:57, Lyudmila Dobysheva via Wien < wien@zeus.theochem.tuwien.ac.at> a écrit : > 02.06.2022 20:21, 413119...@nitt.edu wrote: > > When i tried to calculte elastic constant using IRelast i was

Re: [Wien] Error while calculating elastic constant using IRelast

2022-06-04 Thread Lyudmila Dobysheva via Wien
02.06.2022 20:21, 413119...@nitt.edu wrote: When i tried to calculte elastic constant using IRelast i was getting error as mentioned below.I dont know why the path of WIEN@k library is shown while executing calljob_lapw.so i kindly request you to look into this and help me to solve this error.

Re: [Wien] Error in mixer

2022-06-03 Thread Laurence Marks
to get the your 4-18 k-points) -fermit 0.004 > (to damp charge transfer during scf) > > runsp -p -i 100 # do NOT use -orb right from the beginning, but > only after some convergence > > > Regards > > > > Best regards. > > > > > > Kosuke Nakano

Re: [Wien] Error in mixer

2022-06-03 Thread Peter Blaha
t; Date: 2022/06/03 Fri. 08:42 > Subject: Re: [Wien] Error in mixer > > > Without more info it is not possible to pin the problem. > > The only info are the qtl-b warnings for several atoms and energies > around -8 Ry, which might point to ghost bands (leading to a crash

Re: [Wien] Error in mixer

2022-06-03 Thread kousuke_kyo_u
mpared >to the smallest spheres ? The smallest RMT in the system is RMT=1.64 for O(Z=8), and the largest is 2.46 for Sr(Z=38). Best regards. Kosuke Nakano > - Original Message - > > From: "Peter Blaha" > To: "wien@zeus.theochem.tuwien.ac.at"

Re: [Wien] Error in mixer

2022-06-03 Thread Peter Blaha
Without more info it is not possible to pin the problem. The only info are the qtl-b warnings for several atoms and energies around -8 Ry, which might point to ghost bands (leading to a crash later on). Are these warnings in the last iteration which ran through but leading to the large

[Wien] Error while calculating elastic constant using IRelast

2022-06-02 Thread 413119008
Respected Sir, I am using Wien2k 19.2 version in my workstation with ubuntu OS.When i tried to calculte elastic constant using IRelast i was getting error as mentioned below.I dont know why the path of WIEN@k library is shown while executing calljob_lapw.so i kindly

[Wien] Error in mixer

2022-06-02 Thread kousuke_kyo_u
Dear all, I am running Wien2k version 21.1 on a 128-cores cluster machine with operating system Ubuntu 20.04.2 LTS, fortran compiler "Fortran Intel(R) 64 Compiler Classic for applications running on Intel(R) 64, Version 2021.5.0" and the corresponding Intel MKL libraries. The purpose of my

Re: [Wien] error in parallel calculations

2021-12-28 Thread Gavin Abo
That message is printed by the Linux operating system when a background job finishes [1].  With tcsh, it doesn't look easy to suppress that message.  So I'd say the answer is No, you cannot avoid printing of that message. [1]

Re: [Wien] error in parallel calculations

2021-12-28 Thread SANDEEP ARORA
Sorry, but I want to know how can we avoid the printing of this part ( ( $remote $machine[$p] "cd $PWD;$set_OMP_NUM_THREADS;$t $taskset0 $exe ${def}_$loop.def ;fixerror_lapw ${def}_$loop"; rm -f .lock_$lockfile[$p] ) >& .stdout1_$loop; if ( -f .stdout1_$loop ) bashtime2csh.pl_lapw

Re: [Wien] error in parallel calculations

2021-12-27 Thread Gavin Abo
   Thanks for your help. It's working fine now. but why this message is printing The following is being printed as an informational message that shows that the lapw1 calculation on the first node is Done followed by tcsh commands the lapw1para_lapw script used for the

Re: [Wien] error in parallel calculations

2021-12-26 Thread SANDEEP ARORA
Respected Sir Thanks for your help. It's working fine now. but why this message is printing LAPW1 END [1] - Done ( ( $remote $machine[$p] "cd $PWD;$set_OMP_NUM_THREADS;$t $taskset0 $exe ${def}_$loop.def ;fixerror_lapw ${def}_$loop"; rm -f

Re: [Wien] error in parallel calculations

2021-12-26 Thread Gavin Abo
In the .bashrc file you posted, I see: # If not running interactively, don't do anything case $- in     *i*) ;;   *) return;; esac Have you check if that is returning before WIENROOT is set which could lead to the "lapw1c: command not found". If that this the case, the post at the

[Wien] error in parallel calculations

2021-12-26 Thread SANDEEP ARORA
Dear wien2k user, i have installed wien2k_21.1 in master node of a cluster consisting of two nodes only without any compilation error. it's working fine with serial calculations but when i tried it for k point parallel calculations using test_case directory it gives

Re: [Wien] Error in LAPW2

2021-10-09 Thread Gavin Abo
Maybe the following list of references and words taken from them can help: http://susi.theochem.tuwien.ac.at/reg_user/mailing_list/ - What command(s) was used for the calculation (e.g., init_lapw, run_lapw ..., runsp_lapw [-p] [-so] [-hf] ..., save_lapw)?

Re: [Wien] Error in LAPW2

2021-10-09 Thread Laurence Marks
Do you remember my recent comments about bad models? What are standard values for Li-C bond length, and what are yours? -- Professor Laurence Marks Department of Materials Science and Engineering Northwestern University www.numis.northwestern.edu "Research is to see what everybody else has seen,

[Wien] Error in LAPW2

2021-10-08 Thread shamik chakrabarti
Dear Wien2k users, I have started to simulate the total energy of a structure (file attached) & obtain an error at the 2nd cycle as below; Error in LAPW2 'LAPW2' - semicore band-ranges too large, ghostbands ? Any response is eagerly awaited. with regards -- Dr. Shamik

Re: [Wien] Error in BerryPI Ver. Mar 15, 2021

2021-10-04 Thread Rubel, Oleg
on behalf of turchenko Sent: Saturday, October 2, 2021 10:15 To: wien@zeus.theochem.tuwien.ac.at Subject: [Wien] Error in BerryPI Ver. Mar 15, 2021 Dear WIEN2k Creators and Users, I am running Wien2k v.21.1 on a machine Z370/i7-8700K/32G2133/256G_M.2_PCIE/T2TB_W/8G_GTX1070/600W/ with operat

[Wien] Error in BerryPI Ver. Mar 15, 2021

2021-10-02 Thread turchenko
Dear WIEN2k Creators and Users, I am running Wien2k v.21.1 on a machine Z370/i7-8700K/32G2133/256G_M.2_PCIE/T2TB_W/8G_GTX1070/600W/ with operating system Centos 7, fortran compiler INTEL (parallel_studio_xe_2020), and Python 2.7.5 The purpose of my calculations is to get quantity of

Re: [Wien] Error in BerryPI Ver. Mar 15, 2021

2021-10-02 Thread Rubel, Oleg
Dear Vitalii, thank you for reporting this issue and giving such a nice description (incl. the structure file). I will try to reproduce the error on my end and let you know. Best regards Oleg > On Oct 2, 2021, at 16:15, turchenko wrote: > > Dear WIEN2k Creators and Users, > I am running

Re: [Wien] Error while doing AFM calculation

2021-09-30 Thread Laurence Marks
Please read your own email! It is telling you that your compiler does not accept -fallow-argument-mismatch, which you have included in your compile line option. You should: 1) Do a Google or similar search on -fallow-argument-mismatch to understand. 2) Do fg5 -- help or similar and read it to see

Re: [Wien] Error while doing AFM calculation

2021-09-30 Thread 413119008
Respected sir, while compiling Wien2k 21.1 i am getting the following errors after compiliation. SRC_dstart/compile.msg:f95: error: unrecognized command line option ‘-fallow-argument-mismatch’; did you mean ‘-Wno-argument-mismatch’? SRC_dstart/compile.msg:make[1]: ***

Re: [Wien] Error in 2nd cycle

2021-09-26 Thread shamik chakrabarti
Dear Prof. Blaha, Thank you for your advice, Sir. It's working after reducing ecut to -9 Ry. With regards, On Sun, 26 Sept 2021 at 17:11, Peter Blaha wrote: > If it cannot find the Fe 3p semicore states in a reasonable energy > range, this means that the problem was already

Re: [Wien] Error in 2nd cycle

2021-09-26 Thread Peter Blaha
If it cannot find the Fe 3p semicore states in a reasonable energy range, this means that the problem was already in the first iteration, or in fact during initialization. I'd guess your 2nd atom lost all 3d electrons in the first cycle because of wrong P states. Am 26.09.2021 um 09:47

Re: [Wien] Error in 2nd cycle

2021-09-26 Thread shamik chakrabarti
Dear Prof. Blaha, The error has appeared for atom no. 2 which is Fe & not P. Rmt of Fe was kept to 1.99. Should I reduce Ecut to solve the issue? with regards, On Sun, 26 Sept 2021 at 12:51, Peter Blaha wrote: > This comes most likely from core leakage. During

Re: [Wien] Error in 2nd cycle

2021-09-26 Thread Peter Blaha
This comes most likely from core leakage. During init_lapw you have to reduce -ecut XXX untile the P core states do not leak out anymore. Am 25.09.2021 um 14:09 schrieb shamik chakrabarti: Dear Wien2k users,                 I was trying to simulate the optimized structure of LiFePO4.

[Wien] Error in 2nd cycle

2021-09-25 Thread shamik chakrabarti
Dear Wien2k users, I was trying to simulate the optimized structure of LiFePO4. However, at the second cycle the error appeared as; 'SELECT' - no energy limits found for atom 2 L= 1 'SELECT' - E-bottom -0.73912 E-top -200.0 I have attached the struct file herewith

Re: [Wien] Error while doing AFM calculation

2021-09-22 Thread Laurence Marks
http://www.wien2k.at/reg_user/wien2k_download On Wed, Sep 22, 2021 at 10:13 PM <413119...@nitt.edu> wrote: > > Yes sir. > > Quoting Laurence Marks : > > > Do you have a licence? > > > > On Wed, Sep 22, 2021 at 1:09 PM <413119...@nitt.edu> wrote: > >> > >> Let me try sir.So to do AFM calculation

Re: [Wien] Error while doing AFM calculation

2021-09-22 Thread 413119008
Yes sir. Quoting Laurence Marks : Do you have a licence? On Wed, Sep 22, 2021 at 1:09 PM <413119...@nitt.edu> wrote: Let me try sir.So to do AFM calculation may i have to install wien2k 21.If so how to do? Thanking u in advance Quoting Laurence Marks : > We might be confusing this. > > My

Re: [Wien] Error while doing AFM calculation

2021-09-22 Thread Laurence Marks
Do you have a licence? On Wed, Sep 22, 2021 at 1:09 PM <413119...@nitt.edu> wrote: > > Let me try sir.So to do AFM calculation may i have to install wien2k > 21.If so how to do? > Thanking u in advance > > Quoting Laurence Marks : > > > We might be confusing this. > > > > My suggestion: do a

Re: [Wien] Error while doing AFM calculation

2021-09-22 Thread 413119008
Let me try sir.So to do AFM calculation may i have to install wien2k 21.If so how to do? Thanking u in advance Quoting Laurence Marks : We might be confusing this. My suggestion: do a standard ferromagnetic calculation of the conventional cell. Straight PBE for this and AFM will be horribly

Re: [Wien] Error while doing AFM calculation

2021-09-16 Thread Laurence Marks
We might be confusing this. My suggestion: do a standard ferromagnetic calculation of the conventional cell. Straight PBE for this and AFM will be horribly wrong for the 4f (metallic), but will give you a starting point. You will have to learn how to use -eece or +U _ Professor Laurence

Re: [Wien] Error while doing AFM calculation

2021-09-16 Thread Gavin Abo
Correction below as some text was missing. If I recall correctly, WIEN2k 19.1 had a bug that effected R lattices (thus your R-3m might be effected by it). The fix might have been the SRC_lapw1: coors.f seen under VERSION_21: 10.4.2021 on the updates page:

Re: [Wien] Error while doing AFM calculation

2021-09-16 Thread Gavin Abo
If I recall correctly, WIEN2k 19.1 had a bug that effected R lattices (thus your R-3m might be effected by it). The fix might have been the SRC_lapw1: coors.f seen under VERSION_21: 10.4.2021 on the updates page: http://susi.theochem.tuwien.ac.at/reg_user/updates/ If you are using gfortran

Re: [Wien] Error while doing AFM calculation

2021-09-16 Thread 413119008
Wien2k 19.1.I have given RKMAX 7 and 1000 k points.Used PBE(13).Not much Using Instgen.Give Up nd down for Yb and n for Na and O Quoting Laurence Marks : Why could you not start the base cell? That suggests something very wrong with what you are doing. 1) What version of Wien2k are you using?

Re: [Wien] Error while doing AFM calculation

2021-09-15 Thread Laurence Marks
Why could you not start the base cell? That suggests something very wrong with what you are doing. 1) What version of Wien2k are you using? 2) How are you setting up the spins? 3) What RKMAX, k-points? 4) What functional? 5) Have you adjusted any parameters from the defaults (I hope not)? _

Re: [Wien] Error while doing AFM calculation

2021-09-15 Thread 413119008
sir, I have searched in the mailiing list and tried the solution given in that.Still error occured.I got eroor only after some 21 cycle and for atom 10 L=2.While giving run using normal cell i was not able to even start the scf cycle. Quoting Laurence Marks : Comments/questions

Re: [Wien] Error while doing AFM calculation

2021-09-13 Thread Gavin Abo
In your "NaYbO2 (2).struct" file, I see: ATOM  -2: X=0.3000 Y=0.3000 Z=0.3000 ATOM -15: X=0.7000 Y=0.7000 Z=0.7000 Are those supposed to be 1/3 and 2/3, respectively? If so, maybe it could lead to ghostbands like that seen the post at:

Re: [Wien] Error while doing AFM calculation

2021-09-13 Thread Peter Blaha
I cannot reproduce this. Starting with a case.inst which is nonmagnetic for all atoms except for the AFM Yb, it converges (of course very slowly with the 4f electrons in standard PBE), but in WIEN2k_21 it is stable. In any case, is this the experimentally observed AFM structure ??? Am

Re: [Wien] Error while doing AFM calculation

2021-09-13 Thread Laurence Marks
Comments/questions 1) Have you searched the list for how to handle ghost bands? 2) What are you doing about the Yb 4f? 3) Why are you making a supercell in the first place? 4) Did you calculate the R-3m cell and work out how to handle the 4f there first? 5) When does the error occur -- 1st

[Wien] Error while doing AFM calculation

2021-09-12 Thread 413119008
Respected sir, I have a R-3m compound.While making super cell its symmetry is lowered to P1.So while initialising the X symmetry it shows some warning that the sgroup is hexagonal and you have to change it to the appropriate s group.If i neglect this and run SCF cycle

Re: [Wien] Error in x tetra

2021-09-08 Thread Peeyush Kumar Kamlesh
Thank you so much sir. It is working now. On Tue, Sep 7, 2021 at 3:48 PM Peeyush Kumar Kamlesh < peeyush.physik@gmail.com> wrote: > Dear Sir, > Greetings of the day! > I am running a case of 13 different atomic positions and calculating DoS. > I run > *total 1 tot,s,p,d,f 2 tot,s,p,d,f 3

Re: [Wien] Error in x tetra

2021-09-07 Thread Tran, Fabien
ien@zeus.theochem.tuwien.ac.at Subject: [Wien] Error in x tetra Dear Sir, Greetings of the day! I am running a case of 13 different atomic positions and calculating DoS. I run total 1 tot,s,p,d,f 2 tot,s,p,d,f 3 tot,s,p,d,f 4 tot,s,p,d,f 5 tot,s,p,d,f 6 tot,s,p,d,f 7 tot,s,p,d,f 8 tot,s,p,d,f 9 tot,s,p,d,f 10 tot,s,

[Wien] Error in x tetra

2021-09-07 Thread Peeyush Kumar Kamlesh
Dear Sir, Greetings of the day! I am running a case of 13 different atomic positions and calculating DoS. I run *total 1 tot,s,p,d,f 2 tot,s,p,d,f 3 tot,s,p,d,f 4 tot,s,p,d,f 5 tot,s,p,d,f 6 tot,s,p,d,f 7 tot,s,p,d,f 8 tot,s,p,d,f 9 tot,s,p,d,f 10 tot,s,p,d,f 11 tot,s,p,d,f 12 tot,s,p,d,f 13

Re: [Wien] Error In lapw2 while doing AFM calculation

2021-08-29 Thread Lyudmila Dobysheva
29.08.2021 19:51, 413119...@nitt.edu wrote: > I am workimg on a system and while running afm calculation i got an error in lapw2 . > STOP L2main - QTL-B Error. > This is the error shown in STDOUT file > > 'LAPW2' - can't open unit: 18 > 'LAPW2' -filename: NaYbO1.vsp > 'LAPW2' -

Re: [Wien] Error In lapw2 while doing AFM calculation

2021-08-29 Thread Gavin Abo
The .vsp from a non-spin polarized calculation (run_lapw) doesn't seem right.  It probably should be reading .vspup (or .vspdn) based on uplapw2.error for a spin polarized calculation. As described at [1], mixing those can cause issues.  You might try moving all files from the NaYbO1

[Wien] Error In lapw2 while doing AFM calculation

2021-08-29 Thread 413119008
Respected Sir, I am using Wien2k19.2 in my workstation .I am workimg on a system and while running afm calculation i got an error in lapw2 . STOP L2main - QTL-B Error. This is the error shown in STDOUT file 'LAPW2' - can't open unit: 18 'LAPW2' -filename:

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-06 Thread Gavin Abo
Will you help me now how to locate the "libmpi_usempif08.so.40" The libmpi_usempif08.so.40 seems to be a Open MPI file based on the webpage at: https://superuser.com/questions/1500931/error-in-linking-libmpi-so It looks like Shared Memory Open MPI might have got linked in when you compiled

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-06 Thread venky ch
Dear Prof. Blaha, Thanks for your clarification. Will you help me now how to locate the "libmpi_usempif08.so.40" I would like to know, Is there any relation to the mentioned error and OMP_SWITCH. Do you suggest that I must install wien2k by loading the cray-mpich module instead of the intel

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-06 Thread Peter Blaha
In any queuing system there is a way that your job gets to know which nodes you have. Then use a script to write the .machines file on the fly. Examples at: http://www.wien2k.at/reg_user/faq/ Am 8/6/21 um 8:12 AM schrieb venky ch: Dear Prof. Blaha, Thank you for your reply. Yes, I have also

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-06 Thread venky ch
Dear Prof. Blaha, Thank you for your reply. Yes, I have also loaded the module intel in the job script. Further, I would like to know that If there is no way to get the nodelist from a HPC, then how one could write the .machines files to run the mpi parallelization. Is there any way to have a

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-05 Thread Peter Blaha
You mentioned that you loaded the module intel when compiling wien2k. Did you also load this module when running the code ? PS: Please read the UG about k-point and mpi parallelization. Am 06.08.2021 um 06:50 schrieb venky ch: Dear Prof. Marks, Thanks for your reply. Before installing the

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-05 Thread venky ch
Dear Prof. Marks, Thanks for your reply. Before installing the Wien2k, I have loaded the module intel which drives me to the mpi path as defined in the WIEN2k_OPTIONS. Further, these switches "current:OMP_SWITCH:-qopenmp & current:OMP_SWITCHP:-qopenmp" are automatically selected. I would like

Re: [Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-05 Thread Laurence Marks
Use of openmpi versus Intel mpi, Cray, mvapich etc is not a Wien2k question. You need to ensure that you have a working mpi which you can compile against. Did you read http://www.serc.iisc.ac.in/message-passing-toolkit-cray/ and load the relevant modules? On Thu, Aug 5, 2021 at 2:46 PM venky ch

[Wien] error while loading shared libraries libmpi_usempif08.so.40

2021-08-05 Thread venky ch
Dear Wien2k users, I have successfully installed the Wien2k_21 version at the HPC cluster (CrayXC40) of my institute ( http://www.serc.iisc.ac.in/supercomputer/for-traditional-hpc-simulations-sahasrat/),. While running the parallel calculations there, I noticed a "lapw0_mpi: error" as given

Re: [Wien] Error in "init_mbj_lapw"

2021-07-29 Thread Laurence Marks
Nobody can do more than guess without more information -- please see the guide to posting. Some things: a) What Wien2k version? b) What RMT, RKMAX ? c) Did you first converge with a standard functional then save? d) What does "Check-mixing" yield? ‪On Wed, Jul 28, 2021 at 11:59 PM ‫عبدالرزاق

[Wien] Error in "init_mbj_lapw"

2021-07-28 Thread عبدالرزاق خيرالدين
Hi, When run scf within TB-mBJ, I often encounter the following problem in almost cycle 25 : in cycle 27ETEST: .33503957 CTEST: .3759918 hup: Command not found. LAPW0 END LAPW0 END SELECT - Error SELECT - Error SELECT - Error SELECT - Error > stop error ** Error in Parallel

Re: [Wien] Error while doing AFM calculation

2021-05-22 Thread Laurence Marks
There are two ways to answer your question: a) Someone could work out what the answer is and tell you. However, why should they? b) Someone can point you towards some literature so you can work it out for yourself. This way you will not just learn how to make one for NaYbO2, you can do it in other

Re: [Wien] Error while doing AFM calculation

2021-05-22 Thread 413119008
sir Thanks for your prevuious replies.I have attached the struct file used for non magnetic calculation with this mail.I hope i have done it correctly.But while doing AFM calculation how can i alter this.We are supposed to give two Atoms for oposite spins right? Quoting Peter Blaha

Re: [Wien] Error while doing AFM calculation

2021-05-19 Thread Laurence Marks
As Peter said, your structure is certainly wrong. There is a method already in Wien2k to help avoid this type of problem for oxides. After running "x nn" or "setrmt" you do "grep Bond *.outputnn". This will give you the bond valence sums (see https://en.wikipedia.org/wiki/Bond_valence_method),

Re: [Wien] Error while doing AFM calculation

2021-05-19 Thread Peter Blaha
No, your struct file is certainly not correct. From the header I can see you want to do NaYbO2 So look into your struct file: I see 4 atoms, but a stoichiometry of Na Yb4 O2 ??? Of course, also your RMTs are completely unphysical and the atoms are much too close. If one removes the

Re: [Wien] Error while doing AFM calculation

2021-05-19 Thread 413119008
sir , I have attached the struct file with this mail.I have given in rhombohedral coordinates but i was not sure about the Yb2 positions Quoting "Abo; Gavin Sky" : Search the mailing list archive [1] for the SELECT error with E-top of -200 as maybe one of the past posts such as

Re: [Wien] Error while doing AFM calculation

2021-05-18 Thread Abo; Gavin Sky
Search the mailing list archive [1] for the SELECT error with E-top of -200 as maybe one of the past posts such as [2] can help with resolving that. In your email below, I can see you are using a R lattice but I'm not seeing the case.struct file there that you would need for confirming if the

Re: [Wien] Error while doing AFM calculation

2021-05-18 Thread Laurence Marks
You have an issue with the linearization energy of the semi-core Yb state. This may be due to a problem in your struct file (please provide it) or your in1 file (please provide that). _ Professor Laurence Marks "Research is to see what everybody else has seen, and to think what nobody else

Re: [Wien] Error while doing AFM calculation

2021-05-18 Thread 413119008
sir, I am using wien2k 19.2.Using w2web i have given the input for struct generation and initialisation was done by manually with magnetic Yb Atoms.As i go for SCF run i am getting error in uplapw1 and the error message in uplapw1.error file is as shown below 'SELECT' - no

Re: [Wien] Error while doing AFM calculation

2021-05-18 Thread Peter Blaha
Nobody can help you with only this information. There must be other error messages, ... Describe in detail how you run the calculations, WIEN2k-version, ... Am 18.05.2021 um 11:12 schrieb 413119...@nitt.edu: sir ,    when i run AFM calculation in WIEN2k_19.2 using my system i get

Re: [Wien] Error while doing AFM calculation

2021-05-18 Thread Laurence Marks
You probably have a problem with the linearization energies, which may be due to an earlier problem in lapw0 or with the Yb atom. You should look at the error files (cat *.error), the daytime (cat *day*) and also the log output if it was run as a job. Sometimes just running the steps individually

[Wien] Error while doing AFM calculation

2021-05-18 Thread 413119008
sir , when i run AFM calculation in WIEN2k_19.2 using my system i get an incomplete file for file.output1up and also this results an error in scf calculation.Below is the incomplete file and i request can any body help m to understand why its happening. max number of

[Wien] Error in user's guide about the GLLB-SC potential

2021-05-17 Thread Tran, Fabien
Dear WIEN2k users, For those who are interested in calculations with the GLLB-SC potential, note that there is an error in the 2021 version of the user's guide: it is the file case.inm_vresp (and not case.inm_tau) that has to be created: cp $WIENROOT/SRC_templates/template.inm_vresp

Re: [Wien] error

2021-05-15 Thread Laurence Marks
There should be no issues compiling and running older versions with oneapi. There are probably issues with the latest gfortran (10 or later). --- Prof Laurence Marks "Research is to see what everyone else has seen, and to think what nobody else has thought", Albert Szent-Györgyi

Re: [Wien] error

2021-05-15 Thread Abo; Gavin Sky
If it is happening only with the -10 volume change, then the solution could be to just not use the -10 and use the smaller volume changes like -1, -2, -3, etc. That is if those calculations are completing successfully. I don't think it was reported to the mailing list but in one of my private

<    1   2   3   4   5   6   7   8   9   10   >