Resending as I sent this from a new email address that needed to be
registered in the mailing list.
Sorry to jump in here. Installing PDL on Ubuntu should be very straight
forward from the command line:
sudo apt-get install pdl pgplot5 libpgplot-perl
This *should* also install other PDL dependencies.
More info on http://pdl.perl.org/?page=install
Thanks,
Alfredo
On Monday 16 March 2015 04:41:40 Ted Pedersen wrote:
This is something you do from the command line. Are you using CPAN to
install the modules? If so, then what you can do is
cpan
> force install PDL
So these are two commands you run from the command line (in sudo
mode).
I hope this helps, and that it works!
Good luck,
Ted
On Sun, Mar 15, 2015 at 3:00 PM, <[email protected][1]> wrote:
Hi,
Sorry I am not very familiar with perl, which file should I modify to addthese
lines? Or are these the command that I should type in my shell? Ifyou can
provide more detail about how to fix this PDL issue I will bereally
appreciated. Thanks!
[email protected]_> wrote:>>> Hi,>>>> After I install F77 and
ExtUtils:F77, the error messages are definitely>> different now. Yet while
installing PDL, at the end it still shows>>>> ****>> Cannot find Proj
library, libproj.a. Please add the correct>> library path to Makefile.PL or
install Proj. Cannot find Proj>> header file, proj_api.h. Please add
the correct library path>> to Makefile.PL or install Proj. Skipping build of
PDL::GIS::Proj.>> ****>> make[3]: Leaving directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/GIS/Proj'>> make[3]:
Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/GIS/Proj'>> ****>> Cannot find Proj library, libproj.a.
Please add the correct>> library path to Makefile.PL or install Proj.
Cannot find Proj>> header file, proj_api.h. Please add the correct
library path>> to Makefile.PL or install Proj. Skipping build of
PDL::GIS::Proj.>> ****>> make[3]: Leaving directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/GIS/Proj'>> make[2]: Leaving
directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/GIS'>> make[2]:
Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Transform'>> make[3]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Cartography'>>
make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Transform/Cartography'>> make[3]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Proj4'>> ****>>
Will skip build of PDL::Transform::Proj4 on this system>> ****>> make[3]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Transform/Proj4'>> make[3]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Cartography'>> No
tests defined for PDL::Transform::Cartography extension.>> make[3]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Transform/Cartography'>> make[3]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Proj4'>> ****>>
Will skip build of PDL::Transform::Proj4 on this system>> ****>> make[3]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Transform/Proj4'>> make[2]: Leaving directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform'>> make[2]:
Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Minuit'>> No tests defined for PDL::Minuit extension.>> make[2]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Lib/Minuit'>> make[2]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Compression'>> No tests
defined for PDL::Compression extension.>> make[2]: Leaving directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Compression'>> make[1]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib'>>
make[1]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Perldl2'>> make[2]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Profile'>> make[2]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Perldl2/Profile'>> make[2]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Plugin'>> make[2]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Perldl2/Plugin'>> /usr/bin/perl -MPod::Select -e "podselect('pdl2');" >
pdl2.pod>> Skip ../blib/lib/PDL/Perldl2/Script.pm (unchanged)>> Skip
../blib/lib/PDL/pdl2.pod (unchanged)>> make[2]: Entering directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Profile'>> No tests
defined for PDL::Perldl2::Profile extension.>> make[2]: Leaving directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Profile'>> make[2]:
Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-
ifLc9Q/Perldl2/Plugin'>> No tests defined for PDL::Perldl2::Plugin
extension.>> make[2]: Leaving directory>>
`/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Plugin'>> make[1]:
Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2'>>
CHM/PDL-2.007.tar.gz>> Tests succeeded but one dependency not OK
(Module::Compile)>> CHM/PDL-2.007.tar.gz>> [dependencies] -- NA>>
Running make install>> make test had returned bad status, won't install
without force>>>> It seems like there is some Proj4 stuff missing? I
wonder is there any>> other toolkit I need to install.>>>> Justin>>>> >
It looks like this has to do with ExtUtils::F77. Do you have a fortran>> >
compiler installed? :) If not, go ahead and install one (usually the>>
name>> > includes f77). Then install ExtUtils::F77 individually, and then
try>> PDL>> > again. This is a PDL dependency issue and so doesn't
really have much>> to>> > do>> > with SenseClusters itself, but it's
something I've run into from time>> to>> > time. Hopefully this gets all
the dependencies installed so that>> > SenseClusters can then be re-
installed.>> >>> > Let us know how it goes.>> >>> > Good luck,>> >
Ted>> >>> > On Fri, Mar 13, 2015 at 8:56 PM,
<[email protected]_> wrote:>> >>> >> Hi,>> >>>> >> When I
directly use the command "sudo perl -MCPAN -e 'install PDL' ;">> to>> >>
install PDL, the message shows up>> >>>> >> make[3]: Leaving
directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/GIS/Proj'>>
>> make[2]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/GIS'>> >> make[2]:
Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform'>> >> make[3]:
Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>>
>> make[3]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>>
>> make[3]: Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >>
****>> >> Will skip build of PDL::Transform::Proj4 on this system>> >>
****>> >> make[3]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >>
make[3]: Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>>
>> No tests defined for PDL::Transform::Cartography extension.>> >>
make[3]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>>
>> make[3]: Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >>
****>> >> Will skip build of PDL::Transform::Proj4 on this system>> >>
****>> >> make[3]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >>
make[2]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform'>> >> make[2]:
Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Minuit'>> >> ****>> >>
Can't locate ExtUtils/F77.pm in @INC (@INC contains:>> >>
/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/inc /etc/perl>> >>
/usr0/local/lib/perl/5.14.2 /usr0/local/share/perl/5.14.2>> /usr/lib/perl5>>
>> /usr/share/perl5 /usr/lib/perl/5.14.2 /usr/share/perl/5.14.2>> >>
/usr/local/lib/site_perl /usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p>> >>
/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib .) at (eval 250) line>> >>
2.BEGIN failed--compilation aborted at (eval 250) line 2.>> >>
ExtUtils::F77>> >> module not found. Ought not build PDL::Minuit>> >>
****>> >> make[2]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Minuit'>> >> make[2]:
Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Compression'>> >> No
tests defined for PDL::Compression extension.>> >> make[2]: Leaving
directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Compression'>> >>
make[1]: Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib'>> >> make[1]: Entering
directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2'>> >>
make[2]: Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> make[2]:
Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> make[2]:
Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> make[2]:
Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >>
/usr/bin/perl -MPod::Select -e "podselect('pdl2');" > pdl2.pod>> >> Skip
../blib/lib/PDL/Perldl2/Script.pm (unchanged)>> >> Skip
../blib/lib/PDL/pdl2.pod (unchanged)>> >> make[2]: Entering directory>>
>> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> No
tests defined for PDL::Perldl2::Profile extension.>> >> make[2]: Leaving
directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> make[2]:
Entering directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> No tests
defined for PDL::Perldl2::Plugin extension.>> >> make[2]: Leaving
directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> make[1]:
Leaving directory>> >>
`/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2'>> >>
CHM/PDL-2.007.tar.gz>> >> Tests succeeded but one dependency not OK
(Module::Compile)>> >> CHM/PDL-2.007.tar.gz>> >> [dependencies] --
NA>> >> Running make install>> >> make test had returned bad
status, won't install without force>> >>>> >> It seems like a similar
errors. Actually I think most of the required>> >> component shows up
similar errors. Thanks.>> >>>> >> Justin>> >>>> >> > It looks like PDL
failed to install. Did you try and install PDL>> >> > separately? If so, what
kind of errors did you get with that?>> >> >>> >> > Thanks!>> >> >
Ted>> >> >>> >> > On Fri, Mar 13, 2015 at 3:42 PM,
<[email protected]_> wrote:>> >> >>> >> >> Hi All,>> >>
>>>> >> >> Right now I am trying to install Senseclusters on my
ubuntu>> machine.>> >> I>> >> >> do>> >> >> have sudo account,
so I just use the "perl -MCPAN -e 'install>> >> >>
Bundle::Text::SenseClusters';" command as the documentation>> >>
mentioned.>> >> >>>> >> >> However, after the process is completed,
there is no perl script>> >> >> installed>> >> >> to my /usr/local/bin
folder. At the end of the installation, it>> says>> >> >>>> >> >>
Running make test>> >> >> PERL_DL_NONLAZY=1 /usr/bin/perl "-
MExtUtils::Command::MM">> >> >> "-MTest::Harness" "-e" "undef
*Test::Harness::Switches;>> >> test_harness(0,>> >> >> 'blib/lib',
'blib/arch')" t/*.t>> >> >> t/Text-SenseClusters.t .. ok>> >> >> All tests
successful.>> >> >> Files=1, Tests=1, 0 wallclock secs ( 0.01 usr 0.00
sys + 0.01>> cusr>> >> >> 0.00 csys = 0.02 CPU)>> >> >> Result:
PASS>> >> >> TPEDERSE/Text-SenseClusters-1.03.tar.gz>> >> >> Tests
succeeded but one dependency not OK (PDL)>> >> >> TPEDERSE/Text-
SenseClusters-1.03.tar.gz>> >> >> [dependencies] -- NA>> >> >>
Running make install>> >> >> make test had returned bad status, won't
install without force>> >> >> Running install for module
'Module::Compile'>> >> >> Running make install>> >> >> make test
had returned bad status, won't install without force>> >> >> Running
make for C/CH/CHM/PDL-2.007.tar.gz>> >> >> Has already been
unwrapped into directory>> >> >> /usr1/jchiu1/.cpan/build/PDL-2.007-
M4Shkn>> >> >> Warning: Prerequisite 'Module::Compile => 0.23' for>>
>> >> 'CHM/PDL-2.007.tar.gz'>> >> >> failed when processing
'INGY/Module-Compile-0.35.tar.gz' with>> >> 'make_test>> >> >> => NO'.
Continuing, but chances to succeed are limited.>> >> >> Has already
been made>> >> >> Running make test>> >> >> Has already been
tested within this command>> >> >> Running make install>> >> >>
make test had returned bad status, won't install without force>> >>
>>>> >> >> So I try to manually install each of the component, and it
still>> >> shows>> >> >> the>> >> >> same error. (Seems like the
make install step just can't work as>> it>> >> >> should) Does anyone
know how to fix that? Thank you for reading>> this>> >> >> e-mail.>>
>> >>>> >> >> Justin>> >> >>>> >> >>>> >> >>>> >> >>>> >>
>>>> >> >>>> >>>> ------------------------------------------------------------------------------
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things parallel software development, from weekly thought leadership blogs to
news, videos, case studies, tutorials and more. Take a look and join the
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