Do you need Java support in DRMAA? You can otherwise invoke `aimk` with "-nojava" and disregard this feature.
-- Reuti > Am 22.06.2016 um 15:13 schrieb Himanshu Joshi <[email protected]>: > > Thanks a lot Reuti, > > Now ./aimk command stuck with > > Could not find a path to JavaCC.zip or javacc.jar from '/usr/share/java' > BUILD FAILED > [java] /root/SGE/sge-8.1.9/source/libs/jgdi/build.xml:416: Java > returned: 1 > [java] > [java] Total time: 5 seconds > > BUILD FAILED > /root/SGE/sge-8.1.9/source/build.xml:85: The following error occurred while > executing this line: > /root/SGE/sge-8.1.9/source/build.xml:30: Java returned: 1 > > Total time: 11 seconds > not done > > > Can you please debug and suggest what I need to troubleshoot this isssue > > > > On Wed, Jun 22, 2016 at 5:32 PM, Reuti <[email protected]> wrote: > Hi, > > > Am 20.06.2016 um 15:20 schrieb Himanshu Joshi <[email protected]>: > > > > Hello SGE'rs, > > > > I am usinf FSL from long time. I tries to develop parallel computing > > environment using SGE and downloaded 8.1.9 version and followed the > > instructions > > I was able to execute bootstrap.sh but while running ./aimk the following > > error occurs > > > > > > "Unable to find hwloc.h" > > > > The terminal display is as follows > > > > Building in directory: /root/SGE/sge-8.1.9/source > > making in LINUXAMD64/ for LINUXAMD64 at host localhost.localdomain > > _________C_O_R_E__S_Y_S_T_E_M_____________ > > cc -DSGE_ARCH_STRING=\"lx-amd64\" -O2 -Wstrict-prototypes -DLINUX > > -DLINUXAMD64 -DLINUXAMD64 -D_GNU_SOURCE -DGETHOSTBYNAME_R6 > > -DGETHOSTBYADDR_R8 -DTARGET_64BIT -DSGE_PQS_API -DSPOOLING_dynamic > > -DSECURE -DHAVE_HWLOC=1 -DCOMPILE_DC -D__SGE_COMPILE_WITH_GETTEXT__ > > -D__SGE_NO_USERMAPPING__ -I../common -I../libs -I../libs/uti -I../libs/juti > > -I../libs/gdi -I../libs/japi -I../libs/sgeobj -I../libs/cull -I../libs/comm > > -I../libs/comm/lists -I../libs/sched -I../libs/evc -I../libs/evm > > -I../libs/mir -I../daemons/common -I../daemons/qmaster -I../daemons/execd > > -I../clients/common -I. > > -I/usr/lib/jvm/java-1.7.0-openjdk-1.7.0.101-2.6.6.1.el7_2.x86_64/include > > -I/usr/lib/jvm/java-1.7.0-openjdk-1.7.0.101-2.6.6.1.el7_2.x86_64/include/linux > > -fPIC -c ../libs/sgeobj/sge_binding.c > > In file included from ../libs/sgeobj/sge_binding.h:43:0, > > from ../libs/sgeobj/sge_binding.c:39: > > ../libs/uti/sge_binding_hlp.h:45:21: fatal error: hwloc.h: No such file or > > directory > > # include <hwloc.h> > > you will need to install the developer package of hwlock on your system. > > -- Reuti > > > > ^ > > compilation terminated. > > make: *** [sge_binding.o] Error 1 > > not done > > > > Thanking you in anticipation > > Regards > > > > -- > > Himanshu Joshi > > M.Tech. Cognitive & Neuroscience. > > Ph.D Scholar, > > Department of Psychiatry > > NIMHANS, Bangalore > > > > http://mbial.weebly.com/himanshu-joshi.html > > _______________________________________________ > > SGE-discuss mailing list > > [email protected] > > https://arc.liv.ac.uk/mailman/listinfo/sge-discuss > > > > > -- > Himanshu Joshi > M.Tech. Cognitive & Neuroscience. > Ph.D Scholar, > Department of Psychiatry > NIMHANS, Bangalore > > http://mbial.weebly.com/himanshu-joshi.html _______________________________________________ SGE-discuss mailing list [email protected] https://arc.liv.ac.uk/mailman/listinfo/sge-discuss
