Dear siesta users,
I downloaded 'siesta-trunk-301" version and installed.
I tried several tests, most of them finished succesfully; apart from these
where
van der Waals was included (graphite_vdw_df, ar2_vdw).
I received an error:
*>>>> Running graphite_vdw_df test...
==> Copying pseudopotential file for C.vdw...
==> Running SIESTA as ../../../Obj/siesta
*** glibc detected *** ../../../Obj/siesta: free(): invalid next size
(fast): 0x0000000003b74d00 ***
======= Backtrace: =========
/lib/libc.so.6[0x2b6b5b1c1948]
/lib/libc.so.6(cfree+0x76)[0x2b6b5b1c3a56]
../../../Obj/siesta[0x56f7a3]
../../../Obj/siesta[0x41c595]
../../../Obj/siesta[0x48ccac]
../../../Obj/siesta[0x4a52a8]
../../../Obj/siesta[0x4a5518]
../../../Obj/siesta[0x6595fc]
/lib/libc.so.6(__libc_start_main+0xe6)[0x2b6b5b16c1a6]
../../../Obj/siesta[0x402199]
======= Memory map: ========
00400000-0068e000 r-xp 00000000 08:08 4302051
/home/magda/Desktop/siesta-trunk-301/Obj/siesta
0088d000-008a2000 rw-p 0028d000 08:08 4302051
/home/magda/Desktop/siesta-trunk-301/Obj/siesta
008a2000-028b6000 rw-p 00000000 00:00 0
03a4f000-03d54000 rw-p 00000000 00:00 0
[heap]
2b6b5a7bb000-2b6b5a7d7000 r-xp 00000000 08:05 811030
/lib/ld-2.7.so
2b6b5a7d7000-2b6b5a872000 rw-p 00000000 00:00 0
2b6b5a9d6000-2b6b5a9d8000 rw-p 0001b000 08:05 811030
/lib/ld-2.7.so
2b6b5a9d8000-2b6b5aab1000 r-xp 00000000 08:05 1507868
/usr/lib/libgfortran.so.3.0.0
2b6b5aab1000-2b6b5acb1000 ---p 000d9000 08:05 1507868
/usr/lib/libgfortran.so.3.0.0
2b6b5acb1000-2b6b5acb3000 rw-p 000d9000 08:05 1507868
/usr/lib/libgfortran.so.3.0.0
2b6b5acb3000-2b6b5ad35000 r-xp 00000000 08:05 811026
/lib/libm-2.7.so
2b6b5ad35000-2b6b5af34000 ---p 00082000 08:05 811026
/lib/libm-2.7.so
2b6b5af34000-2b6b5af36000 rw-p 00081000 08:05 811026
/lib/libm-2.7.so
2b6b5af36000-2b6b5af4c000 r-xp 00000000 08:05 811011
/lib/libgcc_s.so.1
2b6b5af4c000-2b6b5b14c000 ---p 00016000 08:05 811011
/lib/libgcc_s.so.1
2b6b5b14c000-2b6b5b14d000 rw-p 00016000 08:05 811011
/lib/libgcc_s.so.1
2b6b5b14d000-2b6b5b14e000 rw-p 00000000 00:00 0
2b6b5b14e000-2b6b5b298000 r-xp 00000000 08:05 811027
/lib/libc-2.7.so
2b6b5b298000-2b6b5b497000 ---p 0014a000 08:05 811027
/lib/libc-2.7.so
2b6b5b497000-2b6b5b49a000 r--p 00149000 08:05 811027
/lib/libc-2.7.so
2b6b5b49a000-2b6b5b49c000 rw-p 0014c000 08:05 811027
/lib/libc-2.7.so
2b6b5b49c000-2b6b5d06f000 rw-p 00000000 00:00 0
2b6b60000000-2b6b60021000 rw-p 00000000 00:00 0
2b6b60021000-2b6b64000000 ---p 00000000 00:00 0
7fff8ee2c000-7fff8ee47000 rw-p 00000000 00:00 0
[stack]
7fff8ef85000-7fff8ef86000 r-xp 00000000 00:00 0
[vdso]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0
[vsyscall]
/bin/sh: line 1: 23739 Przerwane ../../../Obj/siesta 2>&1 >
graphite_vdw_df.out < ../graphite_vdw_df.fdf
make: *** [completed_work] error 134*
It seems that only VDW-DF dosen't work properly.
I insatlled siesta code according insrtuctions giving in manual.
I did following:
Obj$ sh ../Src/obj_setup.sh
/Src/SiestaXC$ touch ../arch.make
/Src/SiestaXC$ make dist
Obj$ ../Src/configure
Obj: make
Obj/SiestaXC/$ cp Siestaxc.mod ../
Obj/SiestaXC/$ cp libSiesta.a ../
Obj/SiestaXC/$ cp *.mod ../
Obj$ make
Many thanks in advance for your help.
