now:

siesta: iscf   Eharris(eV)      E_KS(eV)   FreeEng(eV)   dDmax  Ef(eV)
siesta:    1  -322856.6086  -321897.4955  -321897.4955  4.3754 -4.6544
siesta:    2  -369482.8872  -321593.2662  -321606.9558******** -3.9240
siesta:    3  -322892.9701  -321981.8400  -322024.9239  6.9204 -5.5319
siesta:    4  -322760.0912  -322001.1551  -322020.7656  3.5852 -4.9814
siesta:    5  -322725.4701  -322213.0836  -322219.4165  1.5959 -3.9194
siesta:    6  -326364.9807  -322232.7977  -322266.6891268.8885 -5.0784
siesta:    7  -326521.9062  -322233.7285  -322275.1775275.0563 -5.0678

with logarithmic dDmax:

siesta: iscf   Eharris(eV)      E_KS(eV)   FreeEng(eV)   dDmax  Ef(eV)
siesta:    1  -322856.6086  -321897.4955  -321897.4955  0.6410 -4.6544
siesta:    2  -369482.8872  -321593.2662  -321606.9558  3.7320 -3.9240
siesta:    3  -322892.9701  -321981.8400  -322024.9239  0.8401 -5.5319
siesta:    4  -322760.0912  -322001.1551  -322020.7656  0.5545 -4.9814


Why not printing logarithmic dDmax by default? We should not count the number 
of zero to understand the convergency level...


On 04 February 2013, Artem Baskin <abas...@gmail.com> wrote:
> Hey Siesta/Transiesta Users,
> 
> I have a question about Transiesta. in particular I am interested in how to
> calculate the density of states (total, projected, local) at non
> equilibrium (under non zero bias). The problem is that if I include, let's
> say, a block "ProjectedDensityOfStates" into the regular Transiesta input
> file where I have to choose SolutionMethod as transiesta, then PDOS is not
> calculated since it requires
>  the different SolutionMethod, namely, diagon or norder.
> 
> Another question is did anybody try to calculate non equilibrium charge
> density (due to the bias) from systemlabel.TSDE using Denchar? I have tried
> to input into Denchar the Density Matrix calculated for a system under 1 V
> but I did not find any difference compared to the non-biased case. Any
> comments on this problem?
> 
> One more question. Let's say we have a system whose LUMO orbital is lower
> than the Fermi energy of electrodes in the absolute energy scale. I would
> expect some charging of the sandwiched molecule due to the contacts with
> electrodes. Did anybody tested this effect in Transiesta?
> 
> Any info or comments would be greatly appreciated.
> 
> Best,
> 
> Artem Baskin
> 

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