[slurm-dev] Re: Galaxy integration with Slurm

[evan clark]

You have to edit Job_conf in the config file and define your runners. 
Each runner should have a unique ID and spec for partition. It is very 
simple to setup but I do recommend including the --share flag as galaxy 
will submit a large number of jobs for specific tasks such as unzipping.

Chen, John (IT) <mailto:john.ch...@nyumc.org>
April 21, 2017 2:10 PM
Hi,

I am trying to setup Galaxy with Slurm and the scheduler.  I have 
galaxy setup and running on a server and Slurm running on another 
server with a few nodes.  I want to have Galaxy manage the job.  
Anyone have any recommendation or suggestion on how to get that 
accomplished?

Thanks

JC


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