We use Genedata, but we don't use it instead of the TPP, since they aren't
the same thing. I have a few scripts that I use to merge the data from both
programs together, which helps with some analysis. However, programs like
Expressionist, Decyder MS, and other spectral processing software will
always return lists of peaks that you do not have MSMS on. So if you
determine that you want to id those peaks, then you'll need to do more LCMS
runs to id those peaks via mass lists or extra separations. You just have to
determine what kind of analyses that you want to do in your lab and then use
those tools. For instance, in our lab we use TPP, Genedata Expressionist and
Analyst, BioInquire, plus some other statistical software as needed.

Greg

On Wed, Jan 28, 2009 at 10:56 PM, wzhao6...@gmail.com
<wzhao6...@gmail.com>wrote:

>
> Hi there,
>
> Does anybody have experience with Genedata's Expressionist platform on
> MS data? How does it stack up with TPP?
> Thanks,
>
> David
> >
>

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