There's not meant to be a limitation - can you give an example of a command line that fails?
-----Original Message----- From: spctools-discuss@googlegroups.com [mailto:spctools-disc...@googlegroups.com] On Behalf Of Kristian Sent: Tuesday, April 21, 2009 3:00 PM To: spctools-discuss Subject: [spctools-discuss] Re: Limit on number of pep.xml files that can be analyzed with XInteract? I have installed 4.2.1, but the problem persists. After a bit of experimenting, I've found that XInteract can only handle up to 99 input *.pep.xml files at a time. The operation fails with the message "failed: Operation not permitted". On Apr 16, 1:21 pm, Natalie Tasman <ntas...@systemsbiology.org> wrote: > Hi Kristian, > > Also, 4.2.1 contained many bug fixes. I'm not sure if this would have been > addressed, but it's always most efficient for us if you can try to replicate > the issue on the latest version. > > -Natalie > > On Thu, Apr 16, 2009 at 12:42 PM, Christine Vogel <vogel....@gmail.com>wrote: > > > > > > > I have had some problems before if any of the pep.xml files had identical > > names. Renaming them (and paths/names within the files) solved that > > problem. > > > Christine > > > On Thu, Apr 16, 2009 at 2:17 PM, Brian Pratt <brian.pr...@insilicos.com>wrote: > > >> There's not meant to be a limitation - can you give an example of a > >> command > >> line that fails? > > >> -----Original Message----- > >> From: spctools-discuss@googlegroups.com > >> [mailto:spctools-disc...@googlegroups.com] On Behalf Of Kristian > >> Sent: Thursday, April 16, 2009 11:56 AM > >> To: spctools-discuss > >> Subject: [spctools-discuss] Limit on number of pep.xml files that can be > >> analyzed with XInteract? > > >> I'm using TPP 4.2.0 to analyze cleavable ICAT data from an LCQ. When > >> all replicates are done, I have 120 seperate .pep.xml files to combine > >> and analyze. With earlier versions of TPP (i.e. 3.4) I could analyze > >> them all at once with Xinteract, but with 4.2 the operation simply > >> aborts and fails with no error message. I can analyze the files 40 at > >> a time and then combine the interact.pep files in protein prophet, but > >> I'm curious if and why there's a limitation on the number of input > >> files for Xinteract.- Hide quoted text - > > - Show quoted text - --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to spctools-discuss@googlegroups.com To unsubscribe from this group, send email to spctools-discuss+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
