Is there a chance the lower intensities are due to isotopic correction being applied? What are the "correction" values in the condition.xml file you used.
lgillet wrote: > Hi, > > We have realized some inconsistency in the intensitites reported by > Libra on TPP (v4.0 JETSTREAM rev 2, Build 200810230133 (linux) ): The > intensities are pretty much systematically off (lower?) compared to > the "real" intensities that can be seen in the raw data (profile raw > data or mzXML centroided raw files or .dta exported scans from the > mzXML). > > I made a couple of copy-screen to explain what I mean more in detail. > Here is the link to find the ppt file: > > http://rapidshare.com/files/264430463/Libra_issue.ppt.html > > Note that ALL the Libra intensities reported (113, 114, 115...) are > off compared to what is reported in the dta file (compare numbers on > last slide and first slide) > > Can you please give some feedback on this strange behavior? Where does > Libra fetch the reported intensities from? Is it from the mzXML files > or from the dta files? Are the intensities recomputed by any way by > LIbra? > > Thanks in advance, > > Ludovic > > > --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to spctools-discuss@googlegroups.com To unsubscribe from this group, send email to spctools-discuss+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
