I haven't worked with that Perl module. But I would strongly suggest that you first get the most current version of proteowizard's "mscovert" working from the command-line, and then run this program as a shell command from perl. msconvert, the recommended raw file converter, is under rapid developlment, and I doubt that the module is keeping track of the latest improvements and bug fixes in that code. So my two cents: save yourself the trouble of going through another layer of indirection and just use msconvert as directly as possible.
-Natalie On 3/8/10 8:50 PM, Amit Kumar Yadav wrote:
Dear All, I want to try the cpan module "Xcalibur::Rawfile" to convert RAW files to mzXML/mgf/PKL. Has anyone tried it? How does it work ? Do i need Xcalibur SDK on the machine(windows vista home premium)?
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