here's the parameter you want:

http://www.thegpm.org/tandem/api/pcsemi.html

On Wed, Mar 7, 2012 at 2:49 AM, Amit Yadav <amit007thech...@gmail.com> wrote:
> Hi
>
> Does anyone know how to conduct semi-tryptic searches in x!tandem(native or
> k-score)?
>
> I know about the refinement model but that limits the subsequent searches to
> only those proteins identified in first pass. Is there a way around or am I
> overloooking/missing something?
>
> Regards,
>
> Amit Kumar Yadav
> Senior Research Fellow (SRF-CSIR)
> IGIB, New Delhi (India)
>
> MassWiz Web server
> MassWiz sourceforge project
> MassWiki
>
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