Hi there, We've started to evaluate MsFragger tool, has anybody done a comparison between Comet and MsFragger? Is it complementary to Comet? We've run a couple of MsFragger searches, using parameters converted from comet parameters, it seems MsFragger is focusing more on finding more PTMs, which results in many long peptide hits, and overriding charge option doesn't seem to be working...
Any inputs or comments is greatly appreciated! Thanks, David -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To post to this group, send email to spctools-discuss@googlegroups.com. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
