Hi Aziz, there is no specific maximum size. In general, the larger your database, the greater the memory requirements and CPU time needed for the software tools and the lower your sensitivity, although it depends on the degree of redundancy in your database. Hundreds of MB and hundreds of thousands of protein sequences is routine.
*From:* spctools-discuss@googlegroups.com <spctools-discuss@googlegroups.com> *On Behalf Of *AZIZ ALNAKLI *Sent:* Tuesday, October 20, 2020 9:15 PM *To:* spctools-discuss@googlegroups.com *Subject:* [spctools-discuss] maximum fasta file size Hi what is the maximum fasta file size that TPP can handle? Anyone knows? Thank you all. -- *Aziz Alnakli* Master of Research Candidate (Bioinformatics Research Group) *Faculty of Science and Engineering** | * Level 1 Room 120, F7B Building (4 Wally's Walk) Macquarie University, NSW 2109, Australia *M:* + 61 424375954* | **aziz.alna...@students.mq.edu.au <aziz.alna...@students.mq.edu.au>* [image: Image removed by sender. Macquarie University] <http://mq.edu.au/> -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/CANqhZV4npzoZMuEkNiivFHpcdpENUgzdJLyHb0rANiUFeksceA%40mail.gmail.com <https://groups.google.com/d/msgid/spctools-discuss/CANqhZV4npzoZMuEkNiivFHpcdpENUgzdJLyHb0rANiUFeksceA%40mail.gmail.com?utm_medium=email&utm_source=footer> . -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/spctools-discuss/ff866da069b346e6b74a6c9f44a3d561%40mail.gmail.com.
