Thanks Mike! `extend_existing=True` is having the partially-specified 
explicit models pick up all the remaining columns.

On Tuesday, August 18, 2020 at 11:29:39 AM UTC-7 Mike Bayer wrote:

> your reflect() call requires extend_existing=True in this case otherwise 
> existing Table objects as the one you are creating with SqaGlobalContext 
> will not be affected.
>
>
>
> On Tue, Aug 18, 2020, at 1:59 PM, Vitaly Kruglikov wrote:
>
> Dear all,
>
> I am using:
> sqlalchemy==1.3.18
> psycopg2==2.8.4
> connection url schema: "postgresql+psycopg2://..."
> postgres 10.x
>
> when I define an explicit AutomapBase-derived model for 
> 'sqa_global_context'  table with only the primary key, I expected that 
> running `Base.metadata.reflect(bind=database.ENGINE, 
> only=['sqa_global_context']); Base.prepare()` would backfill missing 
> columns and relationships in that table. However, after running 
> `Base.prepare(engine, reflect=True)`, the missing columns and relationships 
> are not populated in my table.
>
> My code looks like this:
>
> ```
> _AutomapBase = automap.automap_base()
>
> class SqaGlobalContext(_AutomapBase):
>     """Type template for the SqaGlobalContext table."""
>     __tablename__ = 'sqa_global_context'
>
>     key = sa.Column(
>         sa.Integer, primary_key=True, server_default=sa.text('0'))
>
>     _AutomapBase.metadata.reflect(bind=ENGINE, 
> only=['ewf_sqa_global_context', <other related table names of interest>])
>     _AutomapBase.prepare()
> ```
>
> The reason I use `_AutomapBase.metadata.reflect(ENGINE, only=[...])` 
> followed by `_AutomapBase.prepare()` instead of just 
> `_AutomapBase.prepare(ENGINE, reflect=True)` is because 
> `_AutomapBase.prepare(ENGINE, reflect=True)` ends up reflecting **all** the 
> tables in the database and I wanted to avoid the unnecessary overhead of 
> reflecting the many additional tables that are managed by another subsystem 
> not of interest to my application.
>
> So, after running the above code, I expected `SqaGlobalContext` model to 
> be populated with additional columns (`created_at`, `updated_at`, etc.) and 
> relationships based on foreign keys (see below for actual table DDL). But 
> the missing columns and relationships didn't get added:
>
> ```
>
> dir(SqaGlobalContext)
>
> ['__abstract__', '__class__', '__delattr__', '__dict__', '__dir__', 
> '__doc__', '__eq__', '__format__', '__ge__', '__getattribute__', '__gt__', 
> '__hash__', '__init__', '__init_subclass__', '__le__', '__lt__', 
> '__mapper__', '__module__', '__ne__', '__new__', '__reduce__', 
> '__reduce_ex__', '__repr__', '__setattr__', '__sizeof__', '__str__', 
> '__subclasshook__', '__table__', '__tablename__', '__weakref__', 
> '_decl_class_registry', '_sa_class_manager', '_sa_decl_prepare', 
> '_sa_raise_deferred_config', 'classes', 'key', 'metadata', 'prepare']
>
> ```
>
>
> As you can see from `dir(SqaGlobalContext)` - the additional columns 
> didn't get populated in `SqaGlobalContext`. So, how can I make this work 
> without reflecting the all the tables in the database?
>
> Alembic outputs this when generating this table:
>
> ```
> INFO  [sqlalchemy.engine.base.Engine] 
> CREATE TABLE ewf_sqa_global_context (
> key INTEGER DEFAULT 0 NOT NULL, 
> created_at TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, 
> updated_at TIMESTAMP WITH TIME ZONE DEFAULT now() NOT NULL, 
> testing_suspended BOOLEAN DEFAULT false NOT NULL, 
> metadata_tag VARCHAR(256) DEFAULT NULL, 
> attempt_number INTEGER DEFAULT NULL, 
> attempt_context_id INTEGER DEFAULT NULL, 
> CONSTRAINT pk_ewf_sqa_global_context PRIMARY KEY (key), 
> CONSTRAINT fk_ewf_sqa_global_context_metadata_tag_ewf_empower_metadata 
> FOREIGN KEY(metadata_tag) REFERENCES ewf_empower_metadata (tag) ON DELETE 
> RESTRICT ON UPDATE CASCADE, 
> CONSTRAINT fk_ewf_sqa_global_context_attempt_context_id_ewf_sqa_at_0183 
> FOREIGN KEY(attempt_context_id) REFERENCES ewf_sqa_attempt_context (key) ON 
> DELETE RESTRICT ON UPDATE CASCADE
> ```
>
> Actual Schema in database.
> ```
> CREATE TABLE public.ewf_sqa_global_context
> (
>     key integer NOT NULL DEFAULT 0,
>     created_at timestamp with time zone NOT NULL DEFAULT now(),
>     updated_at timestamp with time zone NOT NULL DEFAULT now(),
>     testing_suspended boolean NOT NULL DEFAULT false,
>     metadata_tag character varying(256) COLLATE pg_catalog."default" 
> DEFAULT NULL::character varying,
>     attempt_number integer,
>     attempt_context_id integer,
>     CONSTRAINT pk_ewf_sqa_global_context PRIMARY KEY (key),
>     CONSTRAINT 
> fk_ewf_sqa_global_context_attempt_context_id_ewf_sqa_at_0183 FOREIGN KEY 
> (attempt_context_id)
>         REFERENCES public.ewf_sqa_attempt_context (key) MATCH SIMPLE
>         ON UPDATE CASCADE
>         ON DELETE RESTRICT,
>     CONSTRAINT fk_ewf_sqa_global_context_metadata_tag_ewf_empower_metadata 
> FOREIGN KEY (metadata_tag)
>         REFERENCES public.ewf_empower_metadata (tag) MATCH SIMPLE
>         ON UPDATE CASCADE
>         ON DELETE RESTRICT
> ```
>
>
> --
> SQLAlchemy - 
> The Python SQL Toolkit and Object Relational Mapper
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