I also had this problem and never took time to debug it or report a bug.
Generally sup-sync fix it. Sometimes also working on a draft can duplicate
it and trying to remove the duplicate leads to this problem. Last time
I directly ran a console and removed it from the index.

Excerpts from Kevin Riggle's message of Sun Oct 26 23:07:23 +0100 2008:
> Working with a draft message today got me lots of exceptions, usually
> when I saved the draft and went back to my inbox.  (These all took the
> same form, so I've only attached one of them.)  Running sup-sync didn't
> help.  Attempting to /delete/ a draft (open the message, hit 'e' on the
> draft, quit my editor, close the buffer in Sup, hit 'y' for discard) got
> me a segfault in Ruby (the stock Ubuntu package thereof):
> 
> ./lib/sup/draft.rb:38: [BUG] Segmentation fault ruby 1.8.6 (2007-09-24) 
> [x86_64-linux] 
> Aborted
> 
> FYI.
> 
> - Kevin
> --- EOFError from thread: main
> End-of-File Error occured at <except.c>:93 in xraise
> Error occured in compound_io.c:137 - cmpdi_read_i
>         Tried to read past end of file. File length is <1> and tried to read 
> to <30056>
> 
> ./lib/sup/draft.rb:38:in `default'
> ./lib/sup/draft.rb:38:in `[]'
> ./lib/sup/draft.rb:38:in `discard'
> ./lib/sup/util.rb:499:in `send'
> ./lib/sup/util.rb:499:in `method_missing'
> ./lib/sup/modes/resume-mode.rb:43:in `save_as_draft'
> ./lib/sup/mode.rb:49:in `send'
> ./lib/sup/mode.rb:49:in `handle_input'
> ./lib/sup/buffer.rb:240:in `handle_input'
> bin/sup:189

-- 
Nicolas Pouillard aka Ertai
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