On Mon, May 11, 2009 at 4:27 PM, Matthew Toseland
<t...@amphibian.dyndns.org> wrote:
> On Thursday 07 May 2009 01:06:24 Dennis Nezic wrote:
>> On Thu, 7 May 2009 00:23:37 +0100, Matthew Toseland wrote:
>> > On Wednesday 06 May 2009 23:52:22 Juiceman wrote:
>> > >
>> > > On Wed, May 6, 2009 at 12:50 PM, Juiceman  wrote:
>> > > > On Wed, May 6, 2009 at 11:37 AM, Matthew Toseland
>> > > >  wrote:
>> > > >> On Wednesday 06 May 2009 14:43:59 Victor Denisov wrote:
>> > > >>> Matthew Toseland wrote:
>> > > >>> > This is the downside of db4o. If it is a widespread problem,
>> > > >>> > we're
>> > gonna
>> > > >> have
>> > > >>> > to revert it. Which means throwing away more than 6 months
>> > > >>> > work
>> > largely
>> > > >>> > funded by Google's $18K.
>> > > >>>
>> > > >>> I think that using a database is a good idea (although I
>> > > >>> personally would've opted for a relational database such as
>> > > >>> Derby). So I'd prefer to try and understand and fix the issue
>> > > >>> rather than hiding from it :-).
>> > > >>>
>> > > >>> > My database queue is usually pretty empty, even with queued
>> > > >>> > downloads,
>> > but
>> > > >> I
>> > > >>> > have 8G and fast mirrored disks...
>> > > >>>
>> > > >>> The problem's that Freenet *doesn't* even use the amount of
>> > > >>> memory I provide it with (I'm yet to see it use more than 120
>> > > >>> megs out of 320 I allow for the heap). I'd be willing to
>> > > >>> dedicate as much memory as required if only it'd help.
>> > > >>>
>> > > >>> My hard drives are nothing special - 250Gb 7200 RPM Seagate
>> > > >>> ones, 16 Mb cache, SATA2, no NCQ - though definitely not the
>> > > >>> slowest out there. I see ~35 Mb/s read speed and ~28 Mb/s write
>> > > >>> speed for medium-sized files and ~5 Mb/s to 8 Mb/s for small
>> > > >>> files in the tests I'd done. I'll probably have to test the
>> > > >>> same from inside Java to make absolutely sure that it's not
>> > > >>> some weird JVM issue on my platform, though.
>> > > >>>
>> > > >>> > 2650 handles is strange, on unix we are generally limited to
>> > > >>> > 1024 and generally we don't exceed that. Both of your
>> > > >>> > problems may be caused by
>> > > >> flaky
>> > > >>> > hardware, but frankly we do need to run on flaky real world
>> > hardware. :|
>> > > >>>
>> > > >>> I don't have Freenet running right now, will check it later.
>> > > >>> But I2P is using 2670 handles right now, and Azureus uses 1450
>> > > >>> - so 2600 for Freenet is definitely nothing out of the ordinary
>> > > >>> on Windows. Oh, and the highest handle user on my machine is
>> > > >>> MySQL, which uses ~69000 handles and works absolutely fine :-).
>> > > >>>
>> > > >>> >> Same here. Enormous disk queues. I've also compared i/o
>> > > >>> >> counts with
>> > i/o
>> > > >>> >> bytes read/written - that's how I know that i/o operations
>> > > >>> >> are small.
>> > In
>> > > >>> >> the statistics screen, I routinely see 100+ outstanding
>> > > >>> >> database
>> > jobs.
>> > > >>> >> It can't be good.
>> > > >>> >
>> > > >>> > This just confirms that disk I/O is the problem ... and
>> > > >>> > almost
>> > certainly
>> > > >>> > caused by db4o as it goes away if nothing is queued.
>> > > >>>
>> > > >>> My thinking exactly. Would providing you with a snapshot of
>> > > >>> CPU/memory performance under YourKit Profiler (I have academic
>> > > >>> licenses for both 7.5 and 8.0, IIRC) or VisualVM (which is now
>> > > >>> a part of the JDK distributive) on my machine help? Any logging
>> > > >>> I can turn on to help? BTW, I have logging set to ERROR for
>> > > >>> now, as with NORMAL level it logs ~2Mb per minute, adding
>> > > >>> noticeably to overall disk contention.
>> > > >>>
>> > > >>> Regards,
>> > > >>> Victor Denisov.
>> > > >>
>> > > >> One other thing, for both you and Juiceman:
>> > > >> How's the CPU usage? Given how much RAM you have I would expect
>> > > >> node.db4o
>> > to
>> > > >> be cached in memory (how big is it?). But doing a read through
>> > > >> the OS to
>> > the
>> > > >> OS disk cache may cost a lot of CPU (context switch etc) ... Is
>> > > >> there a
>> > lot
>> > > >> of CPU usage for the freenet process? To the point that it might
>> > > >> be the
>> > cause
>> > > >> of the poor overall system performance? And how much CPU usage
>> > > >> is system?
>> > > >>
>> > > >
>> > > > Freenet CPU usage fluctuates between 2 and 27% of a quad core
>> > > > system. The rest of the machine rarely uses more than 15% unless
>> > > > I am gaming, then it still only hits 50%.  CPU usage is quite
>> > > > acceptable for now. I have 3GB of RAM, 512 allocated to Freenet.
>> > >
>> > > Node.db4o was 375 MB.  No uploads, 1 GB of queued downloads.
>> > >
>> > > How often is this file written to?  Anyway to queue writes in a RAM
>> > > buffer and write to disk periodically?
>> >
>> > I don't think so, at least not easily i.e. not without a custom
>> > IoAdapter able to buffer many commits separately. What I don't
>> > understand is what all these writes are *for*. If it's just
>> > downloads, most of the time it should just be selecting a
>> > SplitFileFetcherSubSegment, fetching all the blocks in it (without
>> > accessing the database), updating them all at once when they've
>> > failed, and then selecting a new segment - roughly every 2 minutes.
>> >
>> > However, I guess if most of the fetches succeed, that produces a lot
>> > more traffic. We have to write the block to disk when we fetch it,
>> > look up who owns it (because many fetchers can have a claim on one
>> > block), probably copy it, tell the SFFS and SFFSS about it, write the
>> > update to the SFFS, and then when we've got all the blocks for a
>> > segment do a load more work.
>>
>> My 34MiB node.db40 is written to every couple of seconds. Every-second
>> writes are common. Sometimes the filesize increases -- often times it
>> stays the same -- although every time it changes (according to md5sum).
>> Maybe for larger .db40's this is more problematic :S. What are all
>> these writes for!? :).
>
> That's what I want to know! Do the logging changes I mentioned, find out.
>

Matthew, was the log I sent you useful at all?
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