untar now updated. Thanks for your time with this.

On 10/17/20 4:36 PM, Tobias Klein wrote:

Updated to SVN Rev. 3813.

Still hanging here:

#0  0x000056143eb2f28c in sword::FileMgr::sysOpen(sword::FileDesc*) ()
#1  0x000056143eb18b0b in sword::FileDesc::getFd() ()
#2  0x000056143eb9323b in (anonymous namespace)::untar(void*, char const*) ()
#3  0x000056143eb93b60 in sword::ZipCompress::unTarGZ(int, char const*) ()
#4  0x000056143eb483f6 in sword::InstallMgr::refreshRemoteSource(sword::InstallSource*) ()

Best regards,
Tobias

On 10/17/20 1:52 PM, Troy A. Griffitts wrote:

OK Tobias,

Give it a go when you have a chance and let me know.

Troy


On 10/17/20 12:16 PM, Troy A. Griffitts wrote:
The unTarGZ is also a new method and it looks like it is using the default file handle pool functionality of FileMgr, from looking at your stack trace. Give me about an hour and I'll have a chance to take a look at it. Good news is that it's not having trouble in the CURLFTPTransport. I have the same change queued up for commit for the other 3 transport impls so I will go ahead and commit those, as well. Thank you for working through this with me.

Troy

On October 17, 2020 10:44:18 AM GMT+02:00, Tobias Klein <cont...@tklein.info> wrote:

    Dear Troy,

    Thank you so much for the help and all your work on this.
    Unfortunately the issue is still not resolved for me based on
    your latest commits.

    I have n threads that all run InstallMgr::refreshRemoteSource. n
    corresponds to the number of repositories available, so it's
    currently 10.
    The operation works until at some point things start hanging
    again. Sometime it happens after ten consecutive calls of the
    update function, sometimes already after three times and I also
    had it hanging after only one attempt.
    In the calling function the hanging occurs when I join the
    threads (waiting for them to complete).

    Looking at details in gdb I find this at the point of hanging:

    (gdb) info threads
      Id   Target Id         Frame
      102  Thread 0x7f8e3cdd1700 (LWP 46520) "node_sword_cli"
    0x000056411eacb46c in sword::FileMgr::sysOpen(sword::FileDesc*) ()
      95   Thread 0x7f8e37fff700 (LWP 46514) "node_sword_cli"
    0x000056411eacb283 in sword::FileMgr::sysOpen(sword::FileDesc*) ()
      93   Thread 0x7f8e3ddf6700 (LWP 46511) "node_sword_cli"
    0x000056411eacb283 in sword::FileMgr::sysOpen(sword::FileDesc*) ()
      91   Thread 0x7f8e2bfff700 (LWP 46510) "node_sword_cli"
    0x000056411eacb46c in sword::FileMgr::sysOpen(sword::FileDesc*) ()
    * 90   Thread 0x7f8e2b7fe700 (LWP 46509) "node_sword_cli"
    0x000056411eacb296 in sword::FileMgr::sysOpen(sword::FileDesc*) ()
      1    Thread 0x7f8e3ddf9e00 (LWP 46380) "node_sword_cli"
    0x00007f8e40d98cd7 in __pthread_clockjoin_ex () from
    /lib/x86_64-linux-gnu/libpthread.so.0

    And this stacktrace for each individual thread (relevant portion):
    #0  0x000056411eacb46c in
    sword::FileMgr::sysOpen(sword::FileDesc*) ()
    #1  0x000056411eab4b0b in sword::FileDesc::getFd() ()
    #2  0x000056411eb2fb70 in
    sword::ZipCompress::unTarGZ(sword::FileDesc*, char const*) ()
    #3  0x000056411eae4437 in
    sword::InstallMgr::refreshRemoteSource(sword::InstallSource*) ()

    I'm not sure whether all of these threads here are now hanging
    or only one of them. It could be just the one that the main
    function tries to join right now.

    Another observation is that I am getting random output like this
    during the process (it happens with different conf files, not
    this one all the time):

    error writing
    /home/tobi/.sword/installMgr/20120711005000/mods.d/ngu_BL_1987.conf
    skipping...

    I didn't get these error messages with earlier SVN revisions.

    To be sure I just once more tested with SVN Rev. 3759 and there
    I consistently get 20 out of 20 attempts successful.

    Best regards,
    Tobias

    PS: I'm sending this e-mail the second time, didn't seem to come
    through via mailman the first time (at 9:11 CEST).

    On 10/15/20 8:09 PM, Troy A. Griffitts wrote:

    Dear Tobias,

    Thank you for all the great information.  This enabled me to
    isolate the change which caused the issue.

    So, for a bit of background, SWORD has no calls to mark
    critical sections which might be problematic for re-entrant
    usage.  This has been due to the many implementations of
    threading across many different platforms over the years,
    before C++11.  But, as a policy to support clients which desire
    to use SWORD in a multithreaded manner, we do our best to make
    this safe by advising clients to use separate SWMgr instances
    per thread.  There are still some shared objects in this
    scenario, but we do our best to do all the writing to these
    shared objects upon initialization.  We broke this rule in
    commit 2760, which is what caused your problem.  SWORD have a
    facility to pool open file handles, to help OSs which have
    small open file handle limits.  This work is done in FileMgr. 
    Recently, to support Windows Unicode path names (the commit you
    found which breaks your multithreaded use), we rounded up all
    remaining native file IO calls and replaced them to used
    FileMgr for the IO and then extended FileMgr to handle Windows
    Unicode paths in a Windows-specific manner.  One of these
    changes was in CURLFTPTransport, which is where you are having
    the issue.  The problem is that, where previously this class
    was directly opening a FILE to do its writing, commit 2760
    changed this to use FileMgr to open the file, which involved
    the SWORD-wide file handle pool, and since we are create a new
    file, we are always writing to this shared pool container,
    which is not threadsafe.  My guess is that you have two threads
    trying to update the pool container at exactly the same time. 
    Using the file handle pool is usually safe, because SWMgr
    "opens" all of its file handles on initialization (these are
    not actually opening OS file handles, but instead updating the
    file handle pool container with proxy objects which delay
    actual OS open to on-demand, but the point is this instance of
    shared file handle pool container writing is done on creation
    of the SWMgr, afterward, the shared resource file handle pool
    is only read and each object in the pool is owned by only 1
    thread if the "each thread must have its own SWMgr" rule is
    followed.

    Regardless of the details.  I believe I have committed a fix
    for you.  In short, I have changed CURLFTPTransport to follow
    our rule to avoid writing to shared objects when we might be
    re-entrant.  Here we now use FileMgr's methods which isolate OS
    implementation, but not FileMgr's file handle pool (as it did
    not previously use the pool before this commit).  This should
    allow this to still take advantage of the Windows OS-specific
    implementation, and also avoid the critical section.  Can you
    please try SVN head and let me know if we are back to 20 out of
    20 successes?

    Thanks again for the very helpful debug log and exact revision
    where failure began.

    Troy


    On 10/13/20 10:08 PM, Tobias Klein wrote:

    I managed to get a backtrace to a segmentation fault using GDB.

    It seems like the crash is happening in sword::FileMgr::open( ...

    The starting point is sword::InstallMgr::refreshRemoteSource
    as I was writing before.

    Best regards,
    Tobias

    Program received signal SIGSEGV, Segmentation fault.
    [Switching to Thread 0x7f1af3fff700 (LWP 220833)]
    0x00007f1b027045a4 in sword::FileMgr::open(char const*, int,
    int, bool) () from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    (gdb) backtrace
    #0  0x00007f1b027045a4 in sword::FileMgr::open(char const*,
    int, int, bool) () from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #1  0x00007f1b0276ad7b in sword::(anonymous
    namespace)::my_fwrite(void*, unsigned long, unsigned long,
    void*) ()
       from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #2  0x00007f1b180626bf in ?? () from
    /usr/lib/x86_64-linux-gnu/libcurl-gnutls.so.4
    #3  0x00007f1b18074a2b in ?? () from
    /usr/lib/x86_64-linux-gnu/libcurl-gnutls.so.4
    #4  0x00007f1b1807e2e4 in ?? () from
    /usr/lib/x86_64-linux-gnu/libcurl-gnutls.so.4
    #5  0x00007f1b1807f6f9 in curl_multi_perform () from
    /usr/lib/x86_64-linux-gnu/libcurl-gnutls.so.4
    #6  0x00007f1b18075d13 in curl_easy_perform () from
    /usr/lib/x86_64-linux-gnu/libcurl-gnutls.so.4
    #7  0x00007f1b0276b683 in sword::CURLFTPTransport::getURL(char
    const*, char const*, sword::SWBuf*) () from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #8  0x00007f1b0271d5d2 in
    sword::InstallMgr::remoteCopy(sword::InstallSource*, char
    const*, char const*, bool, char const*) ()
       from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #9  0x00007f1b0271edc7 in
    sword::InstallMgr::refreshRemoteSource(sword::InstallSource*)
    () from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #10 0x00007f1b026ad734 in
    
RepositoryInterface::refreshIndividualRemoteSource(std::__cxx11::basic_string<char,
    std::char_traits<char>, std::allocator<char> >,
    std::function<void (unsigned int)>*) ()
       from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #11 0x00007f1b026b17dd in
    std::thread::_State_impl<std::thread::_Invoker<std::tuple<int
    (RepositoryInterface::*)(std::__cxx11::basic_string<char,
    std::char_traits<char>, std::allocator<char> >,
    std::function<void (unsigned int)>*), RepositoryInterface*,
    std::__cxx11::basic_string<char, std::char_traits<char>,
    std::allocator<char> >, std::function<void (unsigned int)>*> >
    >::_M_run() ()
       from
    
/home/tobi/dev/ezra_project/node-sword-interface-git/build/Release/node_sword_interface.node
    #12 0x00007f1b1d622cb4 in ?? () from
    /usr/lib/x86_64-linux-gnu/libstdc++.so.6
    #13 0x00007f1b1e20a609 in start_thread () from
    /lib/x86_64-linux-gnu/libpthread.so.0
    #14 0x00007f1b1e131103 in clone () from
    /lib/x86_64-linux-gnu/libc.so.6

    On 10/13/20 1:07 PM, Tobias Klein wrote:

    Hi Troy,

    I tested more SVN revisions of SWORD trunk (starting from my
    stable version until I hit the bug) and I can now say that

    SVN Rev. 3759 is the last SVN revision that works without
    hanging for the below mentioned scenario. (20 out of 20 tests
    successful)

    SVN Rev. 3760 is the first SVN revision where the hanging
    occurs. The commit message is "First cut at better isolation
    of FileIO to FileMgr and providing a WIN32 impl with works
    with wchar_t".

    Modified files:
    include/filemgr.h
    include/swbuf.h
    lib/bcppmake/libsword.bpr
    src/mgr/curlftpt.cpp
    src/mgr/curlhttpt.cpp
    src/mgr/filemgr.cpp
    src/mgr/installmgr.cpp
    src/mgr/swmgr.cpp
    src/utilfuns/utilstr.cpp

    Maybe this helps to find the root-cause.

    Best regards,
    Tobias

    On 10/12/20 9:20 PM, Tobias Klein wrote:

    I'll see whether I can collect a stack trace. It may take
    some time until I have it.

    The multi-threaded "remote source refreshing" worked without
    issues until recently.

    Here is the code of the function that does the actual work
    in a thread.
    See
    
https://github.com/tobias-klein/node-sword-interface/blob/787160ccb4b3bab2a762d22f74031c7237edc803/src/sword_backend/repository_interface.cpp#L105.

    
intRepositoryInterface::refreshIndividualRemoteSource(stringremoteSourceName,
    std::function<void(unsignedintprogress)>*progressCallback)
    {
    //cout << "Refreshing source " << remoteSourceName << endl
    << flush;
    InstallSource* source= this->getRemoteSource(remoteSourceName);
    intresult= this->_installMgr->refreshRemoteSource(source);
    if(result!= 0) {
    cerr<<"Failed to refresh source
    "<<remoteSourceName<<endl<<flush;
    }
    remoteSourceUpdateMutex.lock();
    this->_remoteSourceUpdateCount++;
    unsignedinttotalPercent=
    (unsignedint)calculateIntPercentage<double>(this->_remoteSourceUpdateCount,
    this->_remoteSourceCount);
    if(progressCallback!= 0) {
    (*progressCallback)(totalPercent);
    }
    remoteSourceUpdateMutex.unlock();
    returnresult;
    }

    Best regards,
    Tobias

    On 10/12/20 9:01 PM, Troy A. Griffitts wrote:
    Any luck getting a stack trace on crash?

    Regarding the "multitheaded mode", I'd have to get a bit
    more information as to exactly how you are sharing SWORD
    objects across your threads. Generally, as a rule, you
    shouldn't. We recommend a separate instance of SWMgr per
    thread and that probably goes for InstallMgr, as well.

    Troy

    On October 12, 2020 8:29:31 PM GMT+02:00, Tobias Klein
    <cont...@tklein.info> wrote:

        Hi Troy,

        I'm using curl on all three platforms.

        Regarding the timeout configuration I have not changed
        anything yet, to make this configurable in Ezra Project
        is still on my todo list.

        I just checked on Linux.
        With the old version (May 18th 2020) no hanging or
        crash in 10 out of 10 times.
        WIth the new version (latest trunk / SWORD 1.9 RC3) I
        get 1 x crash, 2 x hanging, 7 x working.

        I'm running the InstallMgr::refreshRemoteSource "in a
        multi-threaded mode".

        Best regards,
        Tobias

        On 10/12/20 6:59 PM, Troy A. Griffitts wrote:
        Hi Tobias,

        What transport library are you building with? ftplib
        or curl?

        Have you changed the value of our new timeout from the
        default, I believe we decided on, 10 seconds?

        Troy

        On October 12, 2020 6:46:54 PM GMT+02:00, Tobias Klein
        <cont...@tklein.info> wrote:

            Hi Troy,

            In my latest Ezra Project builds using SWORD trunk I’ve been noticing 
random „hangs“ and crashes related to "updating remote sources“. I suppose it 
must be around InstallMgr::refreshRemoteSource.

            This was still rock solid when using SWORD trunk from May 18th 
2020, but not so any more with the recent SWORD trunk.

            Unfortunately I cannot pinpoint this more specifically. I just 
wanted to first share this observation, because it’s worrying me.

            I’ve been noticing this regression both on Windows and macOS. Need 
to check later whether this also happens on Linux, cannot recall it right now.

            Best regards,
            Tobias
            
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