I am not sure why the plugin works fine Taverna 2.1 and in 2.2 encounters
this error, but I have found if you increase the file descriptor limit (for
example, http://hausheer.osola.com/docs/11). This does do the trick.
>
net.sf.taverna.t2.activities.biomoby.GetOntologyThread.run(GetOntologyThread
.java:57)
> Caused by: java.util.zip.ZipException: error in opening zip file
> at java.util.zip.ZipFile.open(Native Method)
> at java.util.zip.ZipFile.<init>(ZipFile.java:114)
> at java.util.jar.JarFile.<init>(JarFile.java:135)
> at java.util.jar.JarFile.<init>(JarFile.java:72)
> at sun.misc.URLClassPath$JarLoader.getJarFile(URLClassPath.java:646)
> at sun.misc.URLClassPath$JarLoader.access$600(URLClassPath.java:540)
> at sun.misc.URLClassPath$JarLoader$1.run(URLClassPath.java:607)
> at java.security.AccessController.doPrivileged(Native Method)
> at sun.misc.URLClassPath$JarLoader.ensureOpen(URLClassPath.java:599)
> at sun.misc.URLClassPath$JarLoader.getResource(URLClassPath.java:753)
> ... 28 more
Eddie
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