Hi Danny:
I have ~50 files in this format:
File1:
680:209 3006.3
266:123 250.5
62:393 117.3
547:429 161.5
341:311 546.5
132:419 163.3
98:471 306.3
File 2:
266:123 168.0
62:393 119.3
547:429 131.0
341:311 162.3
132:419 149.5
98:471 85.0
289:215 207.0
75:553 517.0
I am generating these files using this module:
f1 = open("test2_cor.txt","r")
ana = f1.read().split('\n')
ana = ana[:-1]
pbs = []
for line in ana:
cols = line.split('\t')
pb = cols[0]
pbs.append(pb)
##########CEL Files section ########
files = glob.glob("c:\files\*.cel")
def parSer(file):
f1 = open(file,'r')
celf = f1.read().split('\n')
celfile = celf[24:409624]
my_vals = celParser(celfile,pbs)
f2 = open(file+'.txt','w')
for line in my_vals:
f2.write(line+'\t')
f2.write('\n')
f2.close()
def main():
for each in files:
parSer(each)
main()
Because, I asked to write a file with the name of the
file as output, it is generating 50 output files for
50 input files.
What I am interested in is to append the output to one
single file but with tab delimmitation.
For example:
for each file there are 2 columns. Cor and val
file 1 file 2 file 3 file 4
cor val cor val cor val cor val
x:x 1345 x:x 5434 x:x 4454 x:x 4462
x:y 3463 x:y 3435 x:y 3435 x:y 3435
Could you suggest a way. Thank you.
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