The first few are out of range. Only have one \t so you only get col[0] and col[1]
Srinivas Iyyer <[EMAIL PROTECTED]> wrote:
['STAG2\tmiR-101', 'SMARCA1\tmiR-101',
'RAP2C\tmiR-101', 'DDX3Y\tmiR-101',
Srinivas Iyyer <[EMAIL PROTECTED]> wrote:
Hello group:
I have a list t and the elements are tab limited.
there are 2 columns:
>>>t
['STAG2\tmiR-101', 'SMARCA1\tmiR-101',
'RAP2C\tmiR-101', 'DDX3Y\tmiR-101',
'AGRN\tmiR-101\tmiR-144', 'EPB41\tmiR-101\tmiR-144',
'PUM1\tmiR-101\tmiR-144',
'KIAA1573\tmiR-101\tmiR-144',
'ST6GALNAC3\tmiR-101\tmiR-144',
'CAPZA1\tmiR-101\tmiR-144']
>>> for i in t:
i = i.strip('')
cols = i.split('\t')
print cols[0]
STAG2
SMARCA1
RAP2C
DDX3Y
AGRN
EPB41
PUM1
KIAA1573
ST6GALNAC3
CAPZA1
>! >> for i in t:
i = i.strip('')
cols = i.split('\t')
print cols[1]
miR-101
miR-101
miR-101
miR-101
miR-101
miR-101
miR-101
miR-101
miR-101
miR-101
>>> for i in t:
i = i.strip('')
cols = i.split('\t')
print cols[2]
Traceback (most recent call last):
File "", line 4, in -toplevel-
print cols[2]
IndexError: list index out of range
>>> for i in t:
i = i.strip('')
cols = i.split('\t')
print cols
['STAG2', 'miR-101']
['SMARCA1', 'miR-101']
['RAP2C', 'miR-101']
['DDX3Y', 'miR-101']
['AGRN', 'miR-101', 'miR-144']
['EPB41', 'miR-101', 'miR-144']
['PUM1', 'miR-101', 'miR-144']
['KIAA1573', 'miR-101', 'miR-144']
['ST6GALNAC3', 'miR-101', 'miR-144']
['CAPZA1', 'miR-101', 'miR-144']
When I try to Print column 2 (0,1,2 which is miR-144)
elements why is it saying index out of range whern
miR-144 is already there.
Can any one please help me.
thanks
Srini
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