Hi,
I'm a beginner at python and I'm trying to extract a specific column from a txt
file ( see attached file).
In the attached file I want to extract the entire column
pph2_prob (i.e. column 16). But I want to get all the values from that
column without the headline
pph2_prob.
How do I accomplish that?
Best,
Anna
#o_snp_id o_acc o_pos o_aa1 o_aa2 snp_id
acc pos aa1 aa2 nt1 nt2
prediction based_on effect pph2_class
pph2_prob pph2_FPR pph2_TPR pph2_FDR site
region PHAT dScore Score1 Score2 Nobs Nstruct
Nfilt PDB_id PDB_pos PDB_ch ident length NormAcc SecStr MapReg dVol
dProp B-fact H-bonds AveNHet MinDHet AveNInt
MinDInt AveNSit MinDSit Transv CodPos CpG
MinDJnc PfamHit IdPmax IdPSNP IdQmin
Comments
BSND_M1I Q8WZ55 1 M I
BSND_M1I Q8WZ55 1 M I G T
probably damaging alignment
deleterious 0.999 0.00692 0.111 0.0222
2.055 2.148 0.093 10 0
1 2 0
0 17.5
BSND_M1K Q8WZ55 1 M K
BSND_M1K Q8WZ55 1 M K T A
probably damaging alignment
deleterious 0.999 0.00692 0.111 0.0222
2.505 2.148 -0.357 10 0
1 1 0
0 17.5
BSND_M1L Q8WZ55 1 M L
BSND_M1L Q8WZ55 1 M L A T
probably damaging alignment
deleterious 0.997 0.0208 0.332 0.0665
1.83 2.148 0.318 10 0
1 0 0
0 17.5
BSND_M1R Q8WZ55 1 M R
BSND_M1R Q8WZ55 1 M R T G
probably damaging alignment
deleterious 0.999 0.00692 0.111 0.0222
2.505 2.148 -0.357 10 0
1 1 0
0 17.5
BSND_M1T Q8WZ55 1 M T
BSND_M1T Q8WZ55 1 M T T C
probably damaging alignment
deleterious 0.999 0.00692 0.111 0.0222
2.505 2.148 -0.357 10 0
0 1 2
0 17.5
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