Thanks for your bugreport. The fact that 3rd party repositories are commented out is a feature, not a bug. If that is the issue here, I would like to close this bugreport now.
Cheers,
Michael
** Changed in: update-manager (Ubuntu)
Status: Unconfirmed => Needs Info
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gksu "update-manager -c" fails to recognise third party repository
https://launchpad.net/bugs/70199
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