I have packagekit installed. This is the situation in my case:

$ apt-config dump|grep Update
APT::Periodic::Update-Package-Lists "1";
APT::Update "";
APT::Update::Post-Invoke-Success "";
APT::Update::Post-Invoke-Success:::: "touch 
/var/lib/apt/periodic/update-success-stamp 2>/dev/null || true";
APT::Update::Post-Invoke-Success:: "/usr/bin/dbus-send --system 
--dest=org.freedesktop.PackageKit --type=method_call 
/org/freedesktop/PackageKit org.freedesktop.PackageKit.StateHasChanged 
string:'cache-update'";

$ dpkg-query -W packagekit
packagekit      0.3.6-0ubuntu4

I have now removed packagekit and will see if the problem occurs again
or not.

The difficulty is though the problem occurred with me only when there
was some software to update, something which happened frequently while
intrepid was in development, but now will happen less often.

-- 
E: The package cache file is corrupted E: _cache->open() failed, please report.
https://bugs.launchpad.net/bugs/257639
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