Hmmmm, everything looks good as far as I can see.

These two lines:-

# kopt=root=UUID=118bcea1-999a-4e47-a192-2cc5fb2982be ro

# groot=(hd0,0)


Are the ones that determine how grub will recreate the menu.lst when needed. 
You shouldn't run into this problem again and the menu.lst should stay the same.

Could you try running:-
sudo update-grub

Which will update your grub file like if you have just installed a new
kernel. Check the menu.lst afterwards, if it all looks good then I think
your problem is solved.

-- 
Unable to boot Ubuntu server after update/upgrade
https://bugs.launchpad.net/bugs/321603
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