This might look similar to the bug (not reported) I noticed after doing
a fresh install of jaunty alpha 4 desktop on ADM64 on a 4GB core2 box.
I'm not playing with GL, COMPIZ, didn´t even switch to nvidia drivers
yet. Happens when going away for multiple days, after having locked
things with vlock -a -s:

1st observation: Xorg presented me with frozen applications (possibly
after killing any screen blanker in the way), with  urxvt windows not
showing text at all, but I still have a moving mouse pointer (though I
am unable to change focus) and firefox is still being able to react on
mouse clicks. Windowmanager is still metacity forced to a still-more-
broken-than-before sloppy focus.

--> as firefox is still partially accessible, it´s not an X-server-only
issue, but different library stacks are also part of the bug.

no chance but to kill X entirely.


2nd observation (while still being away at the moment): vnc just displays the 
dreaded black screen, only displaying the mouse pointer. (both before and after 
killing vlock).

Nothing of interest in Xorg.0.log at all, except that my old logitech
trackball (time to switch and reload NiMH cells, I´d guess) couldn´t be
read. This trackball also was the one and only core pointer. The final
lines in Xorg.0.log show the configuration of the trackball at time
offsets 1, 27380, and finally the loss of the trackball at 36109).

I´ll append more when I´m again in front of the console.

Bug 338495 looks also like it might be related to X kind of freezing.

-- 
X stops responting/updating, console switching still works
https://bugs.launchpad.net/bugs/338495
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