Pity to hear about your problem 'cause avidemux is great.
Here, sound works great with all audio outputs except OSS (no init) and SDL.
SDL failure is similar to yours except that drop is hiss and clock is 1 second.
Not all the way through, though, there are nice passages.
avidemux and system audio are out of the box (no other setting change).
Hardware is Intel too :
>lshw
...
*-multimedia
description: Audio device
product: 82801H (ICH8 Family) HD Audio Controller
vendor: Intel Corporation
physical id: 1b
bus info: p...@0000:00:1b.0
version: 03
width: 64 bits
clock: 33MHz
capabilities: bus_master cap_list
configuration: driver=HDA Intel latency=0 module=snd_hda_intel
** Package changed: avidemux (Ubuntu) => ubuntu
--
8.10 - avidemux - trouble initializing audio device
https://bugs.launchpad.net/bugs/321028
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