I confirm that I've the same problem on one of my machines. I don't know if 
it's related, but it's a machine with an nvidia card and a multi-monittor 
setting: other 2 machines I've, both updated to karmic, do not give this 
problem.
In any case, prior to update the problem was not present at all. I tried the 
proposed solutions, dropping nautilus, system monitor, nautilus, and starting 
using older file managers (I tried rox, gnome-commander and thunar). These 
attempts lessened the problem, but did not make it disappear: being a 
development machine, I make heavy use of it, and I still need to close 
everything and restart X at least a couple times a day.
If somebody can suggest something (apart from formatting and re-installing the 
old ubuntu, my next step) I would greatly appreciate it...

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Nautilus causes memory leak in Xorg?
https://bugs.launchpad.net/bugs/484521
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