I ran autoreconf already, I not sure you read it correctly.

To quote myself:

t...@ubuntu-revo:~/build/rivet$ autoreconf
libtoolize: putting macros in `m4'.
libtoolize: You should add the contents of `m4/libtool.m4' to `aclocal.m4'.
libtoolize: You should add the contents of `m4/ltoptions.m4' to `aclocal.m4'.
libtoolize: You should add the contents of `m4/ltsugar.m4' to `aclocal.m4'.
libtoolize: You should add the contents of `m4/ltversion.m4' to `aclocal.m4'.
libtoolize: You should add the contents of `m4/lt~obsolete.m4' to `aclocal.m4'.
libtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and
libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree.

** Changed in: libtool (Ubuntu)
       Status: Invalid => New

-- 
libtool: Version mismatch error.  This is libtool 2.2.6b 
Debian-2.2.6b-2ubuntu1, but the libtool: definition of this LT_INIT comes from 
an older release.
https://bugs.launchpad.net/bugs/527107
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