Seems that the quirk is not necessary. I had been trying fixes for other 
problems and that was an artifact of that.
Here is what my alsa-base.conf file looks like now with things 
functioning properly:

# autoloader aliases
install sound-slot-0 /sbin/modprobe snd-card-0
install sound-slot-1 /sbin/modprobe snd-card-1
install sound-slot-2 /sbin/modprobe snd-card-2
install sound-slot-3 /sbin/modprobe snd-card-3
install sound-slot-4 /sbin/modprobe snd-card-4
install sound-slot-5 /sbin/modprobe snd-card-5
install sound-slot-6 /sbin/modprobe snd-card-6
install sound-slot-7 /sbin/modprobe snd-card-7

# Cause optional modules to be loaded above generic modules
install snd /sbin/modprobe --ignore-install snd $CMDLINE_OPTS && { 
/sbin/modprobe --quiet --use-blacklist snd-ioctl32 ; /sbin/modprobe 
--quiet --use-blacklist snd-seq ; }
#
# Workaround at bug #499695 (reverted in Ubuntu see LP #319505)
install snd-pcm /sbin/modprobe --ignore-install snd-pcm $CMDLINE_OPTS && 
{ /sbin/modprobe --quiet --use-blacklist snd-pcm-oss ; : ; }
install snd-mixer /sbin/modprobe --ignore-install snd-mixer 
$CMDLINE_OPTS && { /sbin/modprobe --quiet --use-blacklist snd-mixer-oss 
; : ; }
install snd-seq /sbin/modprobe --ignore-install snd-seq $CMDLINE_OPTS && 
{ /sbin/modprobe --quiet --use-blacklist snd-seq-midi ; /sbin/modprobe 
--quiet --use-blacklist snd-seq-oss ; : ; }
#
install snd-rawmidi /sbin/modprobe --ignore-install snd-rawmidi 
$CMDLINE_OPTS && { /sbin/modprobe --quiet --use-blacklist snd-seq-midi ; 
: ; }
# Cause optional modules to be loaded above sound card driver modules
install snd-emu10k1 /sbin/modprobe --ignore-install snd-emu10k1 
$CMDLINE_OPTS && { /sbin/modprobe --quiet --use-blacklist 
snd-emu10k1-synth ; }
install snd-via82xx /sbin/modprobe --ignore-install snd-via82xx 
$CMDLINE_OPTS && { /sbin/modprobe --quiet --use-blacklist snd-seq ; }

# Load saa7134-alsa instead of saa7134 (which gets dragged in by it anyway)
install saa7134 /sbin/modprobe --ignore-install saa7134 $CMDLINE_OPTS && 
{ /sbin/modprobe --quiet --use-blacklist saa7134-alsa ; : ; }
# Prevent abnormal drivers from grabbing index 0
options bt87x index=-2
options cx88_alsa index=-2
options saa7134-alsa index=-2
options snd-atiixp-modem index=-2
options snd-intel8x0m index=-2
options snd-via82xx-modem index=-2
options snd-usb-audio index=-2
options snd-usb-us122l index=-2
options snd-usb-usx2y index=-2
options snd-usb-caiaq index=-2
# Ubuntu #62691, enable MPU for snd-cmipci
options snd-cmipci mpu_port=0x330 fm_port=0x388
# Keep snd-pcsp from being loaded as first soundcard
options snd-pcsp index=-2
# Power down HDA controllers after 10 idle seconds
# options snd-hda-intel power_save=10 power_save_controller=N

# alias snd-card-0 snd-hda-intel
# alias sound-slot-0 snd-hda-intel
# options snd-hda-intel model=3stack-6ch
options snd-hda-intel power_save=0 power_save_controller=N 
position_fix=1 enable=yes

-- 
No line-in/mic capture Realtek ALC883
https://bugs.launchpad.net/bugs/538895
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