The following commands fixed this issue for me on a Toshiba Satellite
U500:

$ sudo -i
# echo 0 > /proc/acpi/thermal_zone/TM0/cooling_mode
# echo 0 > /proc/acpi/fan/FAN0/state

Adding these before the exit 0 in /etc/rc.local helped.

-- 
Ubuntu ACPI/FAN Bug. Overheating issues.
https://bugs.launchpad.net/bugs/572528
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