That's actually expected, only the user has access to gvfs shares:
j...@jak-thinkpad:~/.gvfs$ sudo ls
ls: cannot open directory .: Permission denied
Closing the python-apt bug as invalid.
** Changed in: python-apt (Ubuntu)
Status: Incomplete => Invalid
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Package install from Samba share fails with errno 13
https://bugs.launchpad.net/bugs/640931
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