Some more information:

I have now deleted the via-agp.ko module; agp is now of course disabled.

Gnome now still freezes after about 1 minute, but differently: applets
are still working (showing activity) , I can move the mouse, but I
cannot right or left click -> there are no actions to my mouse clicks
(no action when clicking on menus, no right click menu, no desktop
select area, no wheel scroll, etc...). Keyboard still works ( I can
ctrl-alt-f2 to get to the shell and come back to ctrl-alt-f7).

So I then kill X with ctrl-alt-del, login again, and after about 1
minute the same happens again.

As I said previously, the same happens with via-agp loaded, but then
when I ctrl-alt-del to kill the server I get a kernel panic/complete
system freeze); so this is not the case when via-agp is not loaded.

I'm once again back to the perfectly working kernel 2.6.15...

-- 
system freeze/kernel panic with kernel 2.6.17 (probably due to via-agp)
https://launchpad.net/bugs/53772

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