I suspect this bug (or one very like it) is what just bit me on the
upgrade from Kubuntu 10.10 64-bit to 11.04. It may not be exactly the
same though, since in my case the upgrade didn't get confused by
multiple valid installs - it just plain picked the wrong drive.

Post-install, the reboot brought up a grub prompt with an "ls /" that
listed the contents of an old hard drive I had in the machine with
assorted remnants of a previous install's "/usr" directory. For some
reason, the upgrade process had decided to nominate /dev/sdc1 as the
root of the machine, even though that directory contained no /boot and
no /etc. The *actual* root directory (on /dev/sda1) was ignored.

I'm currently still tinkering to get back to a bootable system - I
suspect missed some references to the incorrect root partition in my
first attempt.

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https://bugs.launchpad.net/bugs/551790

Title:
  lucid update-grub wrong root=UUID=

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