I'm afraid the only way to fix this bug is to rename the "quit" command
to "close" (or "close all windows"), as suggested in comment #8.

Sending SIGTERM leads to other problems:

a) if we send it before closing the application windows, the application
will usually terminate without asking for user input in case it has
unsaved data (for instance, gedit prompts the user to save the current
file only if its window is closed). I'm not sure this is desirable.

b) if we send it after closing the application windows, another inconsistent 
behaviour appears: for example in xchat:
  1) We close the xchat windows -> xchat prompts the user: "minimize, quit or 
ignore?"
  2) user chooses minimize -> xchat windows are closed, and xchat stays to the 
tray
  3) we send SIGTERM -> xchat exits completely, though the user wanted it to 
run minimized.

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https://bugs.launchpad.net/bugs/687724

Title:
  Quicklist's "Quit" doesn't exit certain applications

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