I tried bumping default-fragment-size-msec up to 1000 and then 10000.
It continues to skip.

Regarding "latency", when default-fragment-size-msec was 10000, I
noticed a line saying

( 124.922|   0.000) D: [alsa-sink] sink.c: latency = 1339

in the log during a skip.  After the music was done skipping, I noticed
this:

( 155.288|   0.000) D: [alsa-sink] alsa-sink.c: Latency set to 20.00ms

Not sure which one to believe for "latency".

Anyway, the problem persists regardless of the default-fragment-size-
msec config setting.

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https://bugs.launchpad.net/bugs/996906

Title:
  periodic audio skips with Intel HDA

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