I think I've found some sort of a solution to the problem: 
http://forums.fedoraforum.org/showthread.php?t=269183
Installing the xscreensaver solved the issue for me. I haven't restarted yet, 
but I think it'll keep working after that. 
I'm using GNOME 3.6, by the way.

Hope this helps you solving the issue.

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https://bugs.launchpad.net/bugs/1080847

Title:
  Screensaver not disabled during video playback

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