As per logitech knoledge base, my issue looks like an interference issue, like 
described in that thread:
https://forums.logitech.com/t5/Mice-and-Pointing-Devices/LX5-Mouse-erratic-behavior/m-p/322870

by the way, switching to an other usb port does nothing better.

Note: that issue is quite new on my side, that was unknown in latest
August 2012.

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https://bugs.launchpad.net/bugs/1006145

Title:
  Logitech Mouse not recognised on boot in 12.04

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