I've managed to fix my VirtualBox by uninstalling it, downloading the
latest installer from VirtualBox website and installing it. I suspect
this issue occurs because of the update notifications. I haven't
installed the latest version when VirtualBox notified me, then a more
recent version was published. For some reason VirtualBox kept alerting
me about the previous new version, which I after some time installed.
That's when my issue occurred. Luckily, reinstalling VirtualBox from the
newest source fixed everything.

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https://bugs.launchpad.net/bugs/1098505

Title:
  virtualbox-dkms 4.1.12-dfsg-2ubuntu0.2: virtualbox kernel module
  failed to build

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