I have also tested with gnome-shell and kde from 13.04 repositories and seem to have similar issues. After some time (especially when doing fast subsequent taps on the screen or trying to drag a scrollbar or type on the on-screen keyboard) the main components of the desktop environment (panels, dialogs etc) do not accept a click with tapping, while the cursor continues to move properly at the tapped point and evtest properly reports BTN_TOUCH events.
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