@xor
Hi, my theory is "it's probably not possible for the apt and its front-ends to 
determine which update was security update after the update has been moved to 
-updates channel(until the developers decided to change the 'move-to-updates' 
policy)", I suggest you to upgrade all packages no matter it is from -updates 
channel or -security channel to keep your system safe, for my system I setup 
upgrade all packages from all channels(except -proposed) automatically in 
background using the unattended-upgrade mechanism and currently, hasn't 
encountered any problem.

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https://bugs.launchpad.net/bugs/1370416

Title:
  Security updates are not marked as security

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