I have the same issue as the OP on Ubuntu 15.10 Desktop AMD64. It spits out 
"cryptsetup: unknown fstype, bad password or options?" after the correct 
passphrase is entered then proceeds to boot normally. I thought it was just me, 
because I have a LUKS-encrypted LVM setup that might be different from what 
Ubuntu was expecting in a couple of ways.
1. I set it all up using the command line before going into ubiquity.
2. I set it up using the Ubuntu 14.04(.1, maybe) Desktop AMD64 LiveUSB over a 
year ago. (I did format the partitions containing / and /boot when installing 
15.10.)

In case they help, here are my fstab and crypttab with comments removed:

/dev/mapper/kryptvg-root /               ext4    errors=remount-ro 0       1
UUID=3a58960b-caa8-4573-8730-812bba9b0a69 /boot           ext4    defaults      
  0       2
/dev/mapper/kryptvg-data /data           ext4    defaults        0       2
/dev/mapper/kryptvg-swap none            swap    sw              0       0

krypt /dev/sda3 none luks

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https://bugs.launchpad.net/bugs/1481536

Title:
  "cryptsetup: unknown fstype, bad password or options?" error unlocking
  / decrypting LUKS volume at boot

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