I can solve it as follows :
1) go to http://mgltools.scripps.edu/downloads and click on 
mgltools_Linux-x86_64_1.5.6_Install this will download 
mgltools_Linux-x86_64_1.5.6_Install and the later goes on download folder.

2)To grant execute permission, type the following command at a command prompt:
chmod +x MGLTools-$Version-Linux-x86-Install 

but change it depend on your download folder in my case:

          chmod +x /home/suhad/Downloads/mgltools_Linux-
x86_64_1.5.6_Install

3)Type   sudo /home/suhad/Downloads/mgltools_Linux-x86_64_1.5.6_Install press 
enter
           the wizard for installation begin follow the wizard instruction and 
choose the destination  
            location where you want to install mgltools after finishing the 
wizard go to the 
           destination location and launch the  mgltools_Linux-x86_64_1.5.6 
icon the autodock tools
           will start.

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https://bugs.launchpad.net/bugs/1386163

Title:
  can't open autodock tools TclError

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