I can confirm this is an actual bug as my system is affected too.

My system: Xubuntu 16.04 LTS, x86-64.

My system is an update to a 15.10 installation.

My solution is to switch to a virtual terminal (CTRL+ALT+F<n>) and then
switch back to X session (CTRL+ALT+F7).

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https://bugs.launchpad.net/bugs/1540157

Title:
  Xenial: Mouse pointer disappears after release upgrade

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