Had the same issue, but wihtout libnss-libvirt installed. Switching to
the mirror method also triggers the error.

# sed -i 
's/http:\/\/archive.ubuntu.com\/ubuntu\//mirror:\/\/mirrors.ubuntu.com\/mirrors.txt/g'
 /etc/apt/sources.list
# apt update
0% [Working]
 **** Seccomp prevented execution of syscall 0000000078 on architecture amd64 
****
Reading package lists... Done
E: Method mirror has died unexpectedly!
E: Sub-process mirror returned an error code (31)

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https://bugs.launchpad.net/bugs/1732030

Title:
  'apt update' dies with seccomp error

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