Public bug reported:

What happened
1) Open your browser, navigate to flathub.org, find an app and click to install 
it
2) Open the resulting flatpakref in gnome-software.
3) Notice how the app info is correctly displayed
4) Try to click install, notice how now you get "cannot install source from 
https://dl.flathub.org/repo/: flatpak source flathub already exists"

Note that I have 3.27.92 installed first and then upgraded to 3.28.
After removing all installed apps and remotes I have not been able to
reproduce the issue. It has been suggested that it is an issue in cache
cleanup between versions - probably within ~/.cache/gnome-
software/flatpak/

Furthermore note the actual issue was likely fixed in 3.28, so this is
upgrades from lower than 3.28 to 3.28 which will be affected by cache
upgrade issues.

I have reported the bug upstream here https://gitlab.gnome.org/GNOME
/gnome-software/issues/328

** Affects: gnome-software (Ubuntu)
     Importance: Undecided
         Status: New

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https://bugs.launchpad.net/bugs/1756098

Title:
  Potential cache upgrade issue in 3.28 results in unable to install
  flatpakref due to remote already existing

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