Hi,
I'm not at all an dconf expert.
But after identifying that even base dconf-editor does not let you save things 
I think we can eliminate virt-manager from the equation.

I have added a task to this bug for d-conf to get maintainers of that package 
to take a look.
They might know where to look and after what.

** Also affects: d-conf (Ubuntu)
   Importance: Undecided
       Status: New

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https://bugs.launchpad.net/bugs/1826271

Title:
  virt-manager does not save preferences

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