Public bug reported: Some software, such as https://github.com/mritchielab/FLAMES, requires paftools.js (in addition to minimap2) for converting annotation to bed12 files. It appears that paftools.js is not packaged with minimap2:
``` $ dpkg -L minimap2 /. /usr /usr/bin /usr/bin/minimap2 /usr/share /usr/share/doc /usr/share/doc/minimap2 /usr/share/doc/minimap2/changelog.Debian.gz /usr/share/doc/minimap2/copyright /usr/share/doc/minimap2/minimap2.pdf /usr/share/doc/minimap2/run-unit-test /usr/share/doc/minimap2/test /usr/share/doc/minimap2/test/MT-human.fa.gz /usr/share/doc/minimap2/test/MT-orang.fa.gz /usr/share/doc/minimap2/test/q-inv.fa.gz /usr/share/doc/minimap2/test/q2.fa /usr/share/doc/minimap2/test/t-inv.fa.gz /usr/share/doc/minimap2/test/t2.fa /usr/share/doc/minimap2/test_script /usr/share/doc-base /usr/share/doc-base/minimap2.minimap2 /usr/share/man /usr/share/man/man1 /usr/share/man/man1/minimap2.1.gz ``` It would be helpful if paftools.js were installed along with the minimap2 executable. ** Affects: minimap2 (Ubuntu) Importance: Undecided Status: New -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/2060136 Title: Include paftools.js To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu/+source/minimap2/+bug/2060136/+subscriptions -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs