This bug was fixed in the package partman-auto - 73ubuntu2

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partman-auto (73ubuntu2) hardy; urgency=low

  * Drop the bootable flag from i386/amd64 recipes; it can break existing
    Windows installations when autopartitioning only free space rather than
    a whole disk (LP: #14244). This reinstates the change from 40ubuntu3 now
    that grub-installer ensures that there is one bootable partition.

 -- Colin Watson <[EMAIL PROTECTED]>   Thu, 28 Feb 2008 14:59:36 +0000

** Changed in: partman-auto (Ubuntu)
       Status: Fix Committed => Fix Released

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Automatic partitioning reset boot flag in DOS partition table?
https://bugs.launchpad.net/bugs/14244
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